RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 ANKRD44Q8N8A2 993 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 SRGAP3O43295 1099 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 TPTE2Q6XPS3 522 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 CNNM1Q9NRU3 951 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 PALLDQ8WX93 1383 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 CNTROBQ8N137 903 aa9.76□□□□□ -0.85
TRIM59-208ENST00000543469 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 ATP8B2P98198 1209 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 MEGF6O75095 1541 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 CAMTA1Q9Y6Y1 1673 aa9.75□□□□□ -0.85
TRIM59-208ENST00000543469 STRCP1A6NGW2 1772 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 MAP3K15Q6ZN16 1313 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 TBC1D2BQ9UPU7 963 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
TRIM59-208ENST00000543469 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM59-208ENST00000543469 DIAPH3Q9NSV4 1193 aa9.74□□□□□ -0.85
TRIM59-208ENST00000543469 CDC45O75419 566 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 TCIRG1Q13488 830 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 CHD1LQ86WJ1 897 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 PIGBQ92521 554 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 NBPF5PQ86XG9 351 aaPredicted RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 SPINK5Q9NQ38 1064 aaPredicted RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 SLIT2O94813 1529 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 PEAK1Q9H792 1746 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 IFIT1P09914 478 aaKnown RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 TMC4Q7Z404 712 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 POLD1P28340 1107 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 IL15P40933 162 aaPredicted RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 DDX46Q7L014 1031 aaKnown RBP9.73□□□□□ -0.85
TRIM59-208ENST00000543469 NLRP3Q96P20 1036 aa9.73□□□□□ -0.85
TRIM59-208ENST00000543469 APBB1O00213 710 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 GNPATO15228 680 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 APBA3O96018 575 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 ZBTB40Q9NUA8 1239 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 SH3TC1Q8TE82 1336 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
TRIM59-208ENST00000543469 SLC5A1P13866 664 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 LRRFIP2Q9Y608 721 aaKnown RBP9.72□□□□□ -0.85
TRIM59-208ENST00000543469 NWD2Q9ULI1 1742 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 GLRX3O76003 335 aaKnown RBP9.72□□□□□ -0.85
TRIM59-208ENST00000543469 AOX1Q06278 1338 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
TRIM59-208ENST00000543469 RPS6KA4O75676 772 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 RNF20Q5VTR2 975 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 ATG3Q9NT62 314 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 NIP7Q9Y221 180 aaKnown RBP eCLIP9.71□□□□□ -0.85
TRIM59-208ENST00000543469 PDE8AO60658 829 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 PCCAP05165 728 aaPredicted RBP9.71□□□□□ -0.85
TRIM59-208ENST00000543469 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.85
TRIM59-208ENST00000543469 F6X3S4 739 aa9.71□□□□□ -0.86
TRIM59-208ENST00000543469 TTC39AQ5SRH9 613 aa9.71□□□□□ -0.86
TRIM59-208ENST00000543469 TICAM2Q86XR7 235 aa9.71□□□□□ -0.86
TRIM59-208ENST00000543469 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
TRIM59-208ENST00000543469 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
TRIM59-208ENST00000543469 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
TRIM59-208ENST00000543469 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
TRIM59-208ENST00000543469 GCKRQ14397 625 aa9.7□□□□□ -0.86
TRIM59-208ENST00000543469 UBE3BQ7Z3V4 1068 aa9.7□□□□□ -0.86
TRIM59-208ENST00000543469 SSFA2P28290 1259 aa9.7□□□□□ -0.86
TRIM59-208ENST00000543469 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
TRIM59-208ENST00000543469 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
TRIM59-208ENST00000543469 RBM17Q96I25 401 aaKnown RBP9.7□□□□□ -0.86
TRIM59-208ENST00000543469 TRIM28Q13263 835 aaKnown RBP9.69□□□□□ -0.86
TRIM59-208ENST00000543469 CAVIN4Q5BKX8 364 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 IBTKQ9P2D0 1353 aaPredicted RBP9.69□□□□□ -0.86
TRIM59-208ENST00000543469 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 ANKRD18AQ8IVF6 992 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 DCTPP1Q9H773 170 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 LRP6O75581 1613 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 NEUROD6Q96NK8 337 aa9.69□□□□□ -0.86
TRIM59-208ENST00000543469 NEURL1BA8MQ27 555 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 IRS4O14654 1257 aaPredicted RBP9.68□□□□□ -0.86
TRIM59-208ENST00000543469 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
TRIM59-208ENST00000543469 LNPKQ9C0E8 428 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 ATRNO75882 1429 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 BEND3Q5T5X7 828 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 MARCH10Q8NA82 808 aaPredicted RBP9.68□□□□□ -0.86
TRIM59-208ENST00000543469 BCL9O00512 1426 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
TRIM59-208ENST00000543469 IGSF3O75054 1194 aa9.68□□□□□ -0.86
TRIM59-208ENST00000543469 CEP85Q6P2H3 762 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms