RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	9.3	□□□□□ -0.92
GTF2H3-212	ENST00000543341	COL4A1	P02462	1669 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	NFKBIB	Q15653	356 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	LINC00116	Q8NCU8	138 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	LRRC4B	Q9NT99	713 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	LOC102724428	A0A0B4J2F2	783 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	EIF5	P55010	431 aa	Known RBP	9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SIK1	P57059	783 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SLC39A6	Q13433	755 aa		9.29	□□□□□ -0.92
GTF2H3-212	ENST00000543341	BCAR3	O75815	825 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	CCDC30	Q5VVM6	783 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	USP16	Q9Y5T5	823 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	AAMP	Q13685	434 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	DBF4	Q9UBU7	674 aa	Predicted RBP	9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	IL6ST	P40189	918 aa	Predicted RBP	9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	PROSER3	Q2NL68	480 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	HYPK	Q9NX55	129 aa		9.28	□□□□□ -0.92
GTF2H3-212	ENST00000543341	SPEF2	Q9C093	1822 aa		9.27	□□□□□ -0.92
GTF2H3-212	ENST00000543341	TRIM27	P14373	513 aa		9.27	□□□□□ -0.93
GTF2H3-212	ENST00000543341	FRAT1	Q92837	279 aa	Predicted RBP	9.27	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ERVV-1	B6SEH8	477 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CASP7	P55210	303 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	TRIM28	Q13263	835 aa	Known RBP	9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ATF7IP	Q6VMQ6	1270 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CHPF2	Q9P2E5	772 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	RLBP1	P12271	317 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	HMGB2	P26583	209 aa	Known RBP	9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	G2E3	Q7L622	706 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	AMIGO3	Q86WK7	504 aa		9.26	□□□□□ -0.93
GTF2H3-212	ENST00000543341	GLIPR1L2	Q4G1C9	344 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	BEND3	Q5T5X7	828 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	FLII	Q13045	1269 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ISCA1	Q9BUE6	129 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	NOB1	Q9ULX3	412 aa	Known RBP	9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	PSME4	Q14997	1843 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ARFGEF1	Q9Y6D6	1849 aa		9.25	□□□□□ -0.93
GTF2H3-212	ENST00000543341	DNAJC10	Q8IXB1	793 aa		9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	TTC5	Q8N0Z6	440 aa		9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CAMTA2	O94983	1202 aa		9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CRKL	P46109	303 aa	Known RBP	9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	HDGFL1	Q5TGJ6	251 aa		9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CCDC87	Q9NVE4	849 aa		9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CCDC9	Q9Y3X0	531 aa	Known RBP	9.24	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ZBTB7B	O15156	539 aa	Predicted RBP	9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	RPS6KA4	O75676	772 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	PLBD2	Q8NHP8	589 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ACSBG1	Q96GR2	724 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	BCL2L12	Q9HB09	334 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	RTL9	Q8NET4	1388 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	PHAX	Q9H814	394 aa	Known RBP	9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	SNED1	Q8TER0	1413 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	MAP3K15	Q6ZN16	1313 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ZKSCAN2	Q63HK3	967 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	KSR2	Q6VAB6	950 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ZNF34	Q8IZ26	560 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ZBTB40	Q9NUA8	1239 aa		9.23	□□□□□ -0.93
GTF2H3-212	ENST00000543341	KDM2B	Q8NHM5	1336 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	DOCK2	Q92608	1830 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	IGKV5-2	P06315	115 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	SSFA2	P28290	1259 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	MVP	Q14764	893 aa	Known RBP	9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	TNN	Q9UQP3	1299 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	MTX1	Q13505	466 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	PLA2G12B	Q9BX93	195 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	API5	Q9BZZ5	524 aa	Known RBP	9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ZBTB1	Q9Y2K1	713 aa		9.22	□□□□□ -0.93
GTF2H3-212	ENST00000543341	SLC4A2	P04920	1241 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	FAM182B	Q5T319	152 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CLEC4G	Q6UXB4	293 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	METTL22	Q9BUU2	404 aa	Predicted RBP	9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	PODXL2	Q9NZ53	605 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	USP42	Q9H9J4	1324 aa	Known RBP	9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	FRAT2	O75474	233 aa	Predicted RBP	9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	ALDH1L1	O75891	902 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	TRIM37	O94972	964 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	STARD3NL	O95772	234 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	TXNRD1	Q16881	649 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	SMC4	Q9NTJ3	1288 aa		9.21	□□□□□ -0.93
GTF2H3-212	ENST00000543341	CDHR2	Q9BYE9	1310 aa		9.21	□□□□□ -0.94
GTF2H3-212	ENST00000543341	BECN1	Q14457	450 aa		9.21	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ZNF827	Q17R98	1081 aa		9.21	□□□□□ -0.94
GTF2H3-212	ENST00000543341	FAM161A	Q3B820	660 aa		9.21	□□□□□ -0.94
GTF2H3-212	ENST00000543341	A1BG	P04217	495 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	PNPLA7	Q6ZV29	1317 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	IPO8	O15397	1037 aa	Known RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ATP6V1A	P38606	617 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	RABL6	Q3YEC7	729 aa	Predicted RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.2	□□□□□ -0.94	2e-8	■■■■□ 22.7
GTF2H3-212	ENST00000543341	KAZALD1	Q96I82	304 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	NAP1L5	Q96NT1	182 aa	Predicted RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	SLK	Q9H2G2	1235 aa	Predicted RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	UPF2	Q9HAU5	1272 aa	Known RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CCT4	P50991	539 aa	Known RBP	9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	NARF	Q9UHQ1	456 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	UBN2	Q6ZU65	1347 aa		9.2	□□□□□ -0.94
GTF2H3-212	ENST00000543341	KLRG2	A4D1S0	409 aa	Predicted RBP	9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	TM4SF1	P30408	202 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	C10orf71	Q711Q0	1435 aa		9.19	□□□□□ -0.94

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