RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 ANXA1P04083 346 aa13.45□□□□□ -0.26
CDH4-201ENST00000543233 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
CDH4-201ENST00000543233 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
CDH4-201ENST00000543233 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
CDH4-201ENST00000543233 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
CDH4-201ENST00000543233 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 EGFL6Q8IUX8 553 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 NPHP1O15259 732 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 ADCY5O95622 1261 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 SYT10Q6XYQ8 523 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 C16orf45Q96MC5 204 aaPredicted RBP13.44□□□□□ -0.26
CDH4-201ENST00000543233 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 GNAT3A8MTJ3 354 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
CDH4-201ENST00000543233 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
CDH4-201ENST00000543233 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
CDH4-201ENST00000543233 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 CASQ1P31415 396 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 TDO2P48775 406 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 PKP1Q13835 747 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 ORAI2Q96SN7 254 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
CDH4-201ENST00000543233 C3P01024 1663 aa13.43□□□□□ -0.26
CDH4-201ENST00000543233 KRBA2Q6ZNG9 492 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 PYCARDQ9ULZ3 195 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
CDH4-201ENST00000543233 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 MYO1CO00159 1063 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 PHF14O94880 888 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 NUCB2P80303 420 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 FLIIQ13045 1269 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 FOXD4L6Q3SYB3 417 aaPredicted RBP13.42□□□□□ -0.26
CDH4-201ENST00000543233 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 DNAJC21Q5F1R6 531 aaKnown RBP13.42□□□□□ -0.26
CDH4-201ENST00000543233 FOXD4L3Q6VB84 417 aaPredicted RBP13.42□□□□□ -0.26
CDH4-201ENST00000543233 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
CDH4-201ENST00000543233 USP31Q70CQ4 1352 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 E2F4Q16254 413 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
CDH4-201ENST00000543233 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 POLR3GO15318 223 aaPredicted RBP13.41□□□□□ -0.26
CDH4-201ENST00000543233 CDC45O75419 566 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 CYP2C19P33261 490 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
CDH4-201ENST00000543233 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
CDH4-201ENST00000543233 CRB1P82279 1406 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 KCNQ3O43525 872 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 GUCY2CP25092 1073 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
CDH4-201ENST00000543233 JRKLQ9Y4A0 524 aa13.39□□□□□ -0.27
CDH4-201ENST00000543233 SATB1Q01826 763 aa13.39□□□□□ -0.27
CDH4-201ENST00000543233 RGPD8O14715 1765 aaPredicted RBP13.39□□□□□ -0.27
CDH4-201ENST00000543233 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
CDH4-201ENST00000543233 SDSP20132 328 aa13.39□□□□□ -0.27
CDH4-201ENST00000543233 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
CDH4-201ENST00000543233 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
CDH4-201ENST00000543233 PTPRCP08575 1304 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 SSH2Q76I76 1423 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 TEX35Q5T0J7 233 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 LCMT1Q9UIC8 334 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 LRRFIP2Q9Y608 721 aaKnown RBP13.38□□□□□ -0.27
CDH4-201ENST00000543233 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 RGS12O14924 1447 aa13.38□□□□□ -0.27
CDH4-201ENST00000543233 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 HMMRO75330 724 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 GNAI2P04899 355 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 KIAA1524Q8TCG1 905 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 SYAP1Q96A49 352 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms