RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
LDB3-207ENST00000542786 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
LDB3-207ENST00000542786 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
LDB3-207ENST00000542786 EVA1CP58658 441 aa17.42■□□□□ 0.38
LDB3-207ENST00000542786 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
LDB3-207ENST00000542786 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
LDB3-207ENST00000542786 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
LDB3-207ENST00000542786 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
LDB3-207ENST00000542786 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
LDB3-207ENST00000542786 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
LDB3-207ENST00000542786 CASC1Q6TDU7 716 aa17.41■□□□□ 0.38
LDB3-207ENST00000542786 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
LDB3-207ENST00000542786 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
LDB3-207ENST00000542786 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
LDB3-207ENST00000542786 ERC2O15083 957 aa17.4■□□□□ 0.38
LDB3-207ENST00000542786 CHMLP26374 656 aa17.4■□□□□ 0.38
LDB3-207ENST00000542786 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
LDB3-207ENST00000542786 MYD88Q99836 296 aa17.4■□□□□ 0.38
LDB3-207ENST00000542786 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
LDB3-207ENST00000542786 LRP6O75581 1613 aa17.4■□□□□ 0.38
LDB3-207ENST00000542786 NEXNQ0ZGT2 675 aa17.39■□□□□ 0.38
LDB3-207ENST00000542786 EPHA10Q5JZY3 1008 aa17.39■□□□□ 0.38
LDB3-207ENST00000542786 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.38
LDB3-207ENST00000542786 ESYT1Q9BSJ8 1104 aa17.39■□□□□ 0.38
LDB3-207ENST00000542786 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.38
LDB3-207ENST00000542786 AFDNP55196 1824 aaKnown RBP17.39■□□□□ 0.37
LDB3-207ENST00000542786 CASP7P55210 303 aa17.39■□□□□ 0.37
LDB3-207ENST00000542786 TJP1Q07157 1748 aa17.39■□□□□ 0.37
LDB3-207ENST00000542786 FRAT2O75474 233 aaPredicted RBP17.38■□□□□ 0.37
LDB3-207ENST00000542786 REC8O95072 547 aa17.38■□□□□ 0.37
LDB3-207ENST00000542786 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
LDB3-207ENST00000542786 RABEP1Q15276 862 aa17.37■□□□□ 0.37
LDB3-207ENST00000542786 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
LDB3-207ENST00000542786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
LDB3-207ENST00000542786 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
LDB3-207ENST00000542786 SASH1O94885 1247 aa17.36■□□□□ 0.37
LDB3-207ENST00000542786 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
LDB3-207ENST00000542786 IL17RAQ96F46 866 aa17.36■□□□□ 0.37
LDB3-207ENST00000542786 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
LDB3-207ENST00000542786 ITGB4P16144 1822 aa17.36■□□□□ 0.37
LDB3-207ENST00000542786 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
LDB3-207ENST00000542786 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
LDB3-207ENST00000542786 A1BGP04217 495 aa17.35■□□□□ 0.37
LDB3-207ENST00000542786 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
LDB3-207ENST00000542786 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
LDB3-207ENST00000542786 PIGBQ92521 554 aa17.34■□□□□ 0.37
LDB3-207ENST00000542786 IL25Q9H293 177 aa17.34■□□□□ 0.37
LDB3-207ENST00000542786 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
LDB3-207ENST00000542786 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.37
LDB3-207ENST00000542786 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.37
LDB3-207ENST00000542786 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 BCL9O00512 1426 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 H7C1W4 665 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 DEKP35659 375 aaKnown RBP17.33■□□□□ 0.36
LDB3-207ENST00000542786 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
LDB3-207ENST00000542786 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.36
LDB3-207ENST00000542786 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 COPRSQ9NQ92 184 aa17.33■□□□□ 0.36
LDB3-207ENST00000542786 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.32■□□□□ 0.36
LDB3-207ENST00000542786 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
LDB3-207ENST00000542786 ATP5J2-PTCD1G3V325 749 aa17.32■□□□□ 0.36
LDB3-207ENST00000542786 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
LDB3-207ENST00000542786 UBE3BQ7Z3V4 1068 aa17.32■□□□□ 0.36
LDB3-207ENST00000542786 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
LDB3-207ENST00000542786 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
LDB3-207ENST00000542786 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
LDB3-207ENST00000542786 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
LDB3-207ENST00000542786 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
LDB3-207ENST00000542786 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
LDB3-207ENST00000542786 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
LDB3-207ENST00000542786 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
LDB3-207ENST00000542786 A0A087WZG4 1122 aa17.3■□□□□ 0.36
LDB3-207ENST00000542786 FOXO4P98177 505 aa17.3■□□□□ 0.36
LDB3-207ENST00000542786 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
LDB3-207ENST00000542786 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
LDB3-207ENST00000542786 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
LDB3-207ENST00000542786 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
LDB3-207ENST00000542786 AACSQ86V21 672 aa17.29■□□□□ 0.36
LDB3-207ENST00000542786 SGSM2O43147 1006 aa17.29■□□□□ 0.36
LDB3-207ENST00000542786 DNAJC10Q8IXB1 793 aa17.29■□□□□ 0.36
LDB3-207ENST00000542786 ANAPC15P60006 121 aa17.28■□□□□ 0.36
LDB3-207ENST00000542786 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
LDB3-207ENST00000542786 SLC4A9Q96Q91 983 aa17.28■□□□□ 0.36
LDB3-207ENST00000542786 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
LDB3-207ENST00000542786 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
LDB3-207ENST00000542786 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
LDB3-207ENST00000542786 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
LDB3-207ENST00000542786 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
LDB3-207ENST00000542786 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
LDB3-207ENST00000542786 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.35
LDB3-207ENST00000542786 SIL1Q9H173 461 aa17.27■□□□□ 0.35
LDB3-207ENST00000542786 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
LDB3-207ENST00000542786 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
LDB3-207ENST00000542786 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
LDB3-207ENST00000542786 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
LDB3-207ENST00000542786 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
LDB3-207ENST00000542786 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
LDB3-207ENST00000542786 RAD50Q92878 1312 aa17.25■□□□□ 0.35
LDB3-207ENST00000542786 NWD2Q9ULI1 1742 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms