RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
PDE3A-202ENST00000542675 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
PDE3A-202ENST00000542675 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
PDE3A-202ENST00000542675 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
PDE3A-202ENST00000542675 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
PDE3A-202ENST00000542675 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
PDE3A-202ENST00000542675 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
PDE3A-202ENST00000542675 POTECB2RU33 542 aa16.14■□□□□ 0.17
PDE3A-202ENST00000542675 LMNB1P20700 586 aa16.14■□□□□ 0.17
PDE3A-202ENST00000542675 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
PDE3A-202ENST00000542675 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
PDE3A-202ENST00000542675 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
PDE3A-202ENST00000542675 MAP3K13O43283 966 aa16.12■□□□□ 0.17
PDE3A-202ENST00000542675 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
PDE3A-202ENST00000542675 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
PDE3A-202ENST00000542675 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
PDE3A-202ENST00000542675 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
PDE3A-202ENST00000542675 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
PDE3A-202ENST00000542675 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
PDE3A-202ENST00000542675 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
PDE3A-202ENST00000542675 H0YIN7 160 aa16.1■□□□□ 0.17
PDE3A-202ENST00000542675 HSPA1AP0DMV8 641 aaKnown RBP16.1■□□□□ 0.17
PDE3A-202ENST00000542675 HSPA1BP0DMV9 641 aaKnown RBP16.1■□□□□ 0.17
PDE3A-202ENST00000542675 ARFGEF2Q9Y6D5 1785 aa16.09■□□□□ 0.17
PDE3A-202ENST00000542675 C21orf2O43822 256 aa16.09■□□□□ 0.17
PDE3A-202ENST00000542675 EIF5P55010 431 aaKnown RBP16.09■□□□□ 0.17
PDE3A-202ENST00000542675 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
PDE3A-202ENST00000542675 DCBLD2Q96PD2 775 aa16.09■□□□□ 0.17
PDE3A-202ENST00000542675 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
PDE3A-202ENST00000542675 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
PDE3A-202ENST00000542675 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
PDE3A-202ENST00000542675 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
PDE3A-202ENST00000542675 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
PDE3A-202ENST00000542675 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
PDE3A-202ENST00000542675 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
PDE3A-202ENST00000542675 DCAF8Q5TAQ9 597 aa16.07■□□□□ 0.16
PDE3A-202ENST00000542675 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
PDE3A-202ENST00000542675 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
PDE3A-202ENST00000542675 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
PDE3A-202ENST00000542675 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
PDE3A-202ENST00000542675 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
PDE3A-202ENST00000542675 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
PDE3A-202ENST00000542675 KCNQ3O43525 872 aa16.04■□□□□ 0.16
PDE3A-202ENST00000542675 DDNO94850 711 aaPredicted RBP16.04■□□□□ 0.16
PDE3A-202ENST00000542675 A1BGP04217 495 aa16.04■□□□□ 0.16
PDE3A-202ENST00000542675 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
PDE3A-202ENST00000542675 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
PDE3A-202ENST00000542675 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
PDE3A-202ENST00000542675 KIF7Q2M1P5 1343 aa16.03■□□□□ 0.16
PDE3A-202ENST00000542675 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
PDE3A-202ENST00000542675 STARD3NLO95772 234 aa16.03■□□□□ 0.16
PDE3A-202ENST00000542675 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
PDE3A-202ENST00000542675 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
PDE3A-202ENST00000542675 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
PDE3A-202ENST00000542675 A0A087WZG4 1122 aa16.02■□□□□ 0.16
PDE3A-202ENST00000542675 PDE6BP35913 854 aa16.02■□□□□ 0.16
PDE3A-202ENST00000542675 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
PDE3A-202ENST00000542675 ZNF790Q6PG37 636 aa16.02■□□□□ 0.16
PDE3A-202ENST00000542675 SCN4AP35499 1836 aa16.01■□□□□ 0.15
PDE3A-202ENST00000542675 PER1O15534 1290 aaPredicted RBP16.01■□□□□ 0.15
PDE3A-202ENST00000542675 CAMTA2O94983 1202 aa16.01■□□□□ 0.15
PDE3A-202ENST00000542675 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
PDE3A-202ENST00000542675 PYGBP11216 843 aa16■□□□□ 0.15
PDE3A-202ENST00000542675 TEFQ10587 303 aa16■□□□□ 0.15
PDE3A-202ENST00000542675 SPOCK2Q92563 424 aa16■□□□□ 0.15
PDE3A-202ENST00000542675 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
PDE3A-202ENST00000542675 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
PDE3A-202ENST00000542675 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
PDE3A-202ENST00000542675 IL6STP40189 918 aaPredicted RBP15.99■□□□□ 0.15
PDE3A-202ENST00000542675 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
PDE3A-202ENST00000542675 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
PDE3A-202ENST00000542675 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
PDE3A-202ENST00000542675 LTBP3Q9NS15 1303 aa15.98■□□□□ 0.15
PDE3A-202ENST00000542675 SRGNP10124 158 aa15.98■□□□□ 0.15
PDE3A-202ENST00000542675 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
PDE3A-202ENST00000542675 FOXN1O15353 648 aa15.97■□□□□ 0.15
PDE3A-202ENST00000542675 STYK1Q6J9G0 422 aa15.97■□□□□ 0.15
PDE3A-202ENST00000542675 DZIP3Q86Y13 1208 aaKnown RBP15.97■□□□□ 0.15
PDE3A-202ENST00000542675 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
PDE3A-202ENST00000542675 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
PDE3A-202ENST00000542675 NPHP1O15259 732 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 MASTLQ96GX5 879 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
PDE3A-202ENST00000542675 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
PDE3A-202ENST00000542675 ZNF541Q9H0D2 1346 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 ST5P78524 1137 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 NUP98P52948 1817 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 CEMIPQ8WUJ3 1361 aa15.95■□□□□ 0.14
PDE3A-202ENST00000542675 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
PDE3A-202ENST00000542675 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
PDE3A-202ENST00000542675 ATMINO43313 823 aaPredicted RBP15.94■□□□□ 0.14
PDE3A-202ENST00000542675 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
PDE3A-202ENST00000542675 CNTNAP1P78357 1384 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms