RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NEXNQ0ZGT2 675 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 KLHDC4Q8TBB5 520 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
TMEM50B-210ENST00000542230 UTYO14607 1347 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 UBAP1LF5GYI3 381 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 OSBPL3Q9H4L5 887 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 PAPPAQ13219 1627 aa21.29■■□□□ 1
TMEM50B-210ENST00000542230 MTX1Q13505 466 aa21.29■■□□□ 1
TMEM50B-210ENST00000542230 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
TMEM50B-210ENST00000542230 RTL5Q5HYW3 569 aaPredicted RBP21.29■■□□□ 1
TMEM50B-210ENST00000542230 SLC4A9Q96Q91 983 aa21.29■■□□□ 1
TMEM50B-210ENST00000542230 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
TMEM50B-210ENST00000542230 ZBTB3Q9H5J0 574 aa21.29■■□□□ 1
TMEM50B-210ENST00000542230 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
TMEM50B-210ENST00000542230 UNC5CLQ8IV45 518 aa21.28■■□□□ 1
TMEM50B-210ENST00000542230 TBC1D2Q9BYX2 928 aa21.28■■□□□ 1
TMEM50B-210ENST00000542230 LAMB4A4D0S4 1761 aa21.27■■□□□ 1
TMEM50B-210ENST00000542230 PLCH1Q4KWH8 1693 aa21.27■■□□□ 1
TMEM50B-210ENST00000542230 SPATA31A1Q5TZJ5 1347 aa21.27■■□□□ 1
TMEM50B-210ENST00000542230 UBE3BQ7Z3V4 1068 aa21.27■■□□□ 1
TMEM50B-210ENST00000542230 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
TMEM50B-210ENST00000542230 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
TMEM50B-210ENST00000542230 MAP4K4O95819 1239 aaPredicted RBP21.26■□□□□ 0.99
TMEM50B-210ENST00000542230 KIF2CQ99661 725 aa21.26■□□□□ 0.99
TMEM50B-210ENST00000542230 ITGB4P16144 1822 aa21.26■□□□□ 0.99
TMEM50B-210ENST00000542230 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 RBM25P49756 843 aaKnown RBP21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 OS9Q13438 667 aaPredicted RBP21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 SIL1Q9H173 461 aa21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 A0A0G2JS52 829 aa21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
TMEM50B-210ENST00000542230 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
TMEM50B-210ENST00000542230 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
TMEM50B-210ENST00000542230 A0A087WZG4 1122 aa21.24■□□□□ 0.99
TMEM50B-210ENST00000542230 ACSBG1Q96GR2 724 aa21.24■□□□□ 0.99
TMEM50B-210ENST00000542230 STAP2Q9UGK3 403 aa21.24■□□□□ 0.99
TMEM50B-210ENST00000542230 BCL9O00512 1426 aa21.23■□□□□ 0.99
TMEM50B-210ENST00000542230 RILPL2Q969X0 211 aa21.23■□□□□ 0.99
TMEM50B-210ENST00000542230 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
TMEM50B-210ENST00000542230 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
TMEM50B-210ENST00000542230 TRIM6-TRIM34B2RNG4 842 aa21.22■□□□□ 0.99
TMEM50B-210ENST00000542230 SASH1O94885 1247 aa21.22■□□□□ 0.99
TMEM50B-210ENST00000542230 NRAPQ86VF7 1730 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 CASP7P55210 303 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 DDB1Q16531 1140 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 ARXQ96QS3 562 aa21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 SLKQ9H2G2 1235 aaPredicted RBP21.21■□□□□ 0.99
TMEM50B-210ENST00000542230 C8orf37Q96NL8 207 aa21.2■□□□□ 0.98
TMEM50B-210ENST00000542230 CD2BP2O95400 341 aaKnown RBP21.19■□□□□ 0.98
TMEM50B-210ENST00000542230 BECN1Q14457 450 aa21.19■□□□□ 0.98
TMEM50B-210ENST00000542230 USP26Q9BXU7 913 aa21.19■□□□□ 0.98
TMEM50B-210ENST00000542230 TUBGCP6Q96RT7 1819 aa21.19■□□□□ 0.98
TMEM50B-210ENST00000542230 IL25Q9H293 177 aa21.18■□□□□ 0.98
TMEM50B-210ENST00000542230 SLIT2O94813 1529 aa21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 WNK3Q9BYP7 1800 aa21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 RFX5P48382 616 aaPredicted RBP21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 EAF2Q96CJ1 260 aaPredicted RBP21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
TMEM50B-210ENST00000542230 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 FAM98CQ17RN3 349 aaKnown RBP21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 HDAC5Q9UQL6 1122 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 NUP188Q5SRE5 1749 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 H7C1W4 665 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 G3BP1Q13283 466 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 AACSQ86V21 672 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 CCDC8Q9H0W5 538 aaPredicted RBP21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 ZBTB1Q9Y2K1 713 aa21.16■□□□□ 0.98
TMEM50B-210ENST00000542230 KCNQ2O43526 872 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 CHMLP26374 656 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 FOXO4P98177 505 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 CWC25Q9NXE8 425 aaPredicted RBP21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 STARD3NLO95772 234 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 HLFQ16534 295 aa21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 THRAP3Q9Y2W1 955 aaKnown RBP21.15■□□□□ 0.98
TMEM50B-210ENST00000542230 DOT1LQ8TEK3 1739 aa21.14■□□□□ 0.97
TMEM50B-210ENST00000542230 RABL6Q3YEC7 729 aaPredicted RBP21.14■□□□□ 0.97
TMEM50B-210ENST00000542230 SYNE4Q8N205 404 aa21.14■□□□□ 0.97
TMEM50B-210ENST00000542230 CHMP3Q9Y3E7 222 aa21.14■□□□□ 0.97
TMEM50B-210ENST00000542230 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.13■□□□□ 0.97
TMEM50B-210ENST00000542230 CASC1Q6TDU7 716 aa21.13■□□□□ 0.97
TMEM50B-210ENST00000542230 ERC2O15083 957 aa21.12■□□□□ 0.97
TMEM50B-210ENST00000542230 ESYT1Q9BSJ8 1104 aa21.12■□□□□ 0.97
TMEM50B-210ENST00000542230 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
TMEM50B-210ENST00000542230 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
TMEM50B-210ENST00000542230 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 IFIT2P09913 472 aaKnown RBP21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 AOX1Q06278 1338 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 GPTP24298 496 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms