RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.17
PRKAB1-206ENST00000541640 KDM6AO15550 1401 aaPredicted RBP16.08■□□□□ 0.17
PRKAB1-206ENST00000541640 RAPGEF4Q8WZA2 1011 aa16.08■□□□□ 0.16
PRKAB1-206ENST00000541640 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.16
PRKAB1-206ENST00000541640 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 ZC3H6P61129 1189 aaKnown RBP16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 ZNF790Q6PG37 636 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 SLC52A2Q9HAB3 445 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 GRM8O00222 908 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 BRD1O95696 1058 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 ZNF445P59923 1031 aa16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
PRKAB1-206ENST00000541640 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 PHKG2P15735 406 aa16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 GPATCH3Q96I76 525 aa16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 UPF3BQ9BZI7 483 aaKnown RBP16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 MRC1P22897 1456 aa16.06■□□□□ 0.16
PRKAB1-206ENST00000541640 KAZALD1Q96I82 304 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 SNX14Q9Y5W7 946 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 MEGF6O75095 1541 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 RUFY2Q8WXA3 655 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 NLRP2Q9NX02 1062 aa16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
PRKAB1-206ENST00000541640 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
PRKAB1-206ENST00000541640 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
PRKAB1-206ENST00000541640 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
PRKAB1-206ENST00000541640 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
PRKAB1-206ENST00000541640 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 CWC27Q6UX04 472 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 IGKV5-2P06315 115 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 NOL8Q76FK4 1167 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 TTC14Q96N46 770 aa16.03■□□□□ 0.16
PRKAB1-206ENST00000541640 RIC3Q7Z5B4 369 aa16.02■□□□□ 0.16
PRKAB1-206ENST00000541640 EVI5LQ96CN4 794 aa16.02■□□□□ 0.16
PRKAB1-206ENST00000541640 DIAPH3Q9NSV4 1193 aa16.02■□□□□ 0.16
PRKAB1-206ENST00000541640 SASH1O94885 1247 aa16.02■□□□□ 0.15
PRKAB1-206ENST00000541640 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.15
PRKAB1-206ENST00000541640 NFATC2IPQ8NCF5 419 aa16.02■□□□□ 0.15
PRKAB1-206ENST00000541640 TNS3Q68CZ2 1445 aa16.02■□□□□ 0.15
PRKAB1-206ENST00000541640 NEXNQ0ZGT2 675 aa16.01■□□□□ 0.15
PRKAB1-206ENST00000541640 G3BP1Q13283 466 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRKAB1-206ENST00000541640 AACSQ86V21 672 aa16.01■□□□□ 0.15
PRKAB1-206ENST00000541640 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
PRKAB1-206ENST00000541640 NEURL1BA8MQ27 555 aa16.01■□□□□ 0.15
PRKAB1-206ENST00000541640 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
PRKAB1-206ENST00000541640 XAGE3Q8WTP9 111 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 KCNB2Q92953 911 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 DCAF5Q96JK2 942 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
PRKAB1-206ENST00000541640 MBD3O95983 291 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 GCKRQ14397 625 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 LRP10Q7Z4F1 713 aa16■□□□□ 0.15
PRKAB1-206ENST00000541640 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
PRKAB1-206ENST00000541640 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 MYL6BP14649 208 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 PPP1R9BQ96SB3 815 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 SLAIN2Q9P270 581 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 HIP1O00291 1037 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 CLCN1P35523 988 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 AK2P54819 239 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 FOXD4L5Q5VV16 416 aaPredicted RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 FOXD4L4Q8WXT5 416 aaPredicted RBP15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 CHAMP1Q96JM3 812 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 LIMCH1Q9UPQ0 1083 aa15.99■□□□□ 0.15
PRKAB1-206ENST00000541640 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 PTH1RQ03431 593 aa15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 TM6SF1Q9BZW5 370 aa15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 CPDO75976 1380 aa15.98■□□□□ 0.15
PRKAB1-206ENST00000541640 CYP27B1O15528 508 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 TTC5Q8N0Z6 440 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 MYD88Q99836 296 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 GLI3P10071 1580 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 COL15A1P39059 1388 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
PRKAB1-206ENST00000541640 LTBP4Q8N2S1 1624 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms