RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 PLEKHG1Q9ULL1 1385 aa18.13■□□□□ 0.49
VARS2-211ENST00000541562 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
VARS2-211ENST00000541562 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
VARS2-211ENST00000541562 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
VARS2-211ENST00000541562 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
VARS2-211ENST00000541562 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
VARS2-211ENST00000541562 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
VARS2-211ENST00000541562 DNM1Q05193 864 aaKnown RBP18.11■□□□□ 0.49
VARS2-211ENST00000541562 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 TSC1Q92574 1164 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 EAF2Q96CJ1 260 aaPredicted RBP18.11■□□□□ 0.49
VARS2-211ENST00000541562 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 USP25Q9UHP3 1055 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 FGD1P98174 961 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 RUFY3Q7L099 469 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 RAPGEF4Q8WZA2 1011 aa18.11■□□□□ 0.49
VARS2-211ENST00000541562 HCLS1P14317 486 aaPredicted RBP18.1■□□□□ 0.49
VARS2-211ENST00000541562 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
VARS2-211ENST00000541562 PRKCSHP14314 528 aaPredicted RBP18.1■□□□□ 0.49
VARS2-211ENST00000541562 A0A087WWV3 80 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 HSPA2P54652 639 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
VARS2-211ENST00000541562 SIRT1Q96EB6 747 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 DBF4Q9UBU7 674 aaPredicted RBP18.09■□□□□ 0.49
VARS2-211ENST00000541562 USP31Q70CQ4 1352 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
VARS2-211ENST00000541562 GJB2P29033 226 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 FAM13BQ9NYF5 915 aa18.09■□□□□ 0.49
VARS2-211ENST00000541562 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.49
VARS2-211ENST00000541562 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.49
VARS2-211ENST00000541562 PDRG1Q9NUG6 133 aa18.08■□□□□ 0.49
VARS2-211ENST00000541562 SGSM2O43147 1006 aa18.08■□□□□ 0.48
VARS2-211ENST00000541562 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
VARS2-211ENST00000541562 SYT1P21579 422 aa18.08■□□□□ 0.48
VARS2-211ENST00000541562 CLCN1P35523 988 aa18.08■□□□□ 0.48
VARS2-211ENST00000541562 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
VARS2-211ENST00000541562 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
VARS2-211ENST00000541562 A0A0D9SFI3 127 aa18.07■□□□□ 0.48
VARS2-211ENST00000541562 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
VARS2-211ENST00000541562 GUCY1B3Q02153 619 aa18.07■□□□□ 0.48
VARS2-211ENST00000541562 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
VARS2-211ENST00000541562 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
VARS2-211ENST00000541562 STK11IPQ8N1F8 1099 aa18.07■□□□□ 0.48
VARS2-211ENST00000541562 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
VARS2-211ENST00000541562 SASH1O94885 1247 aa18.06■□□□□ 0.48
VARS2-211ENST00000541562 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
VARS2-211ENST00000541562 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
VARS2-211ENST00000541562 OSBPL3Q9H4L5 887 aa18.06■□□□□ 0.48
VARS2-211ENST00000541562 TTC12Q9H892 705 aaPredicted RBP18.06■□□□□ 0.48
VARS2-211ENST00000541562 ADCY9O60503 1353 aa18.06■□□□□ 0.48
VARS2-211ENST00000541562 SALL3Q9BXA9 1300 aa18.06■□□□□ 0.48
VARS2-211ENST00000541562 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 A0A0G2JLW4 131 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
VARS2-211ENST00000541562 BRD1O95696 1058 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 TIMM10P62072 90 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
VARS2-211ENST00000541562 GRM8O00222 908 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 HSPA4P34932 840 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 ERCC4Q92889 916 aaPredicted RBP18.04■□□□□ 0.48
VARS2-211ENST00000541562 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 KDRP35968 1356 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 ME3Q16798 604 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 KSR2Q6VAB6 950 aa18.04■□□□□ 0.48
VARS2-211ENST00000541562 STX6O43752 255 aa18.03■□□□□ 0.48
VARS2-211ENST00000541562 TFCP2Q12800 502 aa18.03■□□□□ 0.48
VARS2-211ENST00000541562 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
VARS2-211ENST00000541562 IGKV5-2P06315 115 aa18.03■□□□□ 0.48
VARS2-211ENST00000541562 C3P01024 1663 aa18.03■□□□□ 0.48
VARS2-211ENST00000541562 A0A087WZG4 1122 aa18.02■□□□□ 0.48
VARS2-211ENST00000541562 GLRX3O76003 335 aaKnown RBP18.02■□□□□ 0.48
VARS2-211ENST00000541562 TSPY26PQ9H489 355 aa18.02■□□□□ 0.48
VARS2-211ENST00000541562 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.47
VARS2-211ENST00000541562 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.47
VARS2-211ENST00000541562 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.47
VARS2-211ENST00000541562 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.47
VARS2-211ENST00000541562 JAK2O60674 1132 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 CYP46A1Q9Y6A2 500 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 TECPR2O15040 1411 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 A1BGP04217 495 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 DBNDD2Q9BQY9 259 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 TPCN1Q9ULQ1 816 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
VARS2-211ENST00000541562 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
VARS2-211ENST00000541562 PXDNQ92626 1479 aa18■□□□□ 0.47
VARS2-211ENST00000541562 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
VARS2-211ENST00000541562 ZNF790Q6PG37 636 aa18■□□□□ 0.47
VARS2-211ENST00000541562 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
VARS2-211ENST00000541562 RAD50Q92878 1312 aa18■□□□□ 0.47
VARS2-211ENST00000541562 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
VARS2-211ENST00000541562 HAND2P61296 217 aa18■□□□□ 0.47
VARS2-211ENST00000541562 STAP2Q9UGK3 403 aa18■□□□□ 0.47
VARS2-211ENST00000541562 SSH2Q76I76 1423 aa18■□□□□ 0.47
VARS2-211ENST00000541562 CDC37L1Q7L3B6 337 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms