RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
HMGA2-210ENST00000541363 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
HMGA2-210ENST00000541363 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 TTLL12Q14166 644 aaPredicted RBP17.61■□□□□ 0.41
HMGA2-210ENST00000541363 LRRC27Q9C0I9 530 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 SLC12A7Q9Y666 1083 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC194A0A1B0GVG4 234 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 MYO1BO43795 1136 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 GSTA5Q7RTV2 222 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
HMGA2-210ENST00000541363 KANK3Q6NY19 840 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 NAPBQ9H115 298 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 SOGA1O94964 1423 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 MTHFSP49914 203 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 SARNPP82979 210 aaKnown RBP17.6■□□□□ 0.41
HMGA2-210ENST00000541363 PLCD3Q8N3E9 789 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 SRRTQ9BXP5 876 aaKnown RBP17.6■□□□□ 0.41
HMGA2-210ENST00000541363 SWAP70Q9UH65 585 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 CFAP157Q5JU67 520 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 EPSTI1Q96J88 318 aa17.6■□□□□ 0.41
HMGA2-210ENST00000541363 TXNDC16Q9P2K2 825 aa17.59■□□□□ 0.41
HMGA2-210ENST00000541363 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
HMGA2-210ENST00000541363 ALDH3A1P30838 453 aa17.59■□□□□ 0.41
HMGA2-210ENST00000541363 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
HMGA2-210ENST00000541363 RSRC1Q96IZ7 334 aaKnown RBP17.59■□□□□ 0.41
HMGA2-210ENST00000541363 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.41
HMGA2-210ENST00000541363 CEP57Q86XR8 500 aa17.58■□□□□ 0.41
HMGA2-210ENST00000541363 SLF2Q8IX21 1173 aa17.58■□□□□ 0.41
HMGA2-210ENST00000541363 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.41
HMGA2-210ENST00000541363 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
HMGA2-210ENST00000541363 METTL24Q5JXM2 366 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 USP37Q86T82 979 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 ATRIPQ8WXE1 791 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 BCAR3O75815 825 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 GBP7Q8N8V2 638 aaPredicted RBP17.58■□□□□ 0.4
HMGA2-210ENST00000541363 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 ZNF428Q96B54 188 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 TRIM7Q9C029 511 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 RSPH14Q9UHP6 348 aa17.58■□□□□ 0.4
HMGA2-210ENST00000541363 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
HMGA2-210ENST00000541363 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 CIB2O75838 187 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 MICALL1Q8N3F8 863 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-210ENST00000541363 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 TTC31Q49AM3 519 aaPredicted RBP17.57■□□□□ 0.4
HMGA2-210ENST00000541363 SELENOSQ9BQE4 189 aa17.57■□□□□ 0.4
HMGA2-210ENST00000541363 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 CCT6BQ92526 530 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 GAS8O95995 478 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 ARFGAP3Q9NP61 516 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 HMGB1P1B2RPK0 211 aaPredicted RBP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 CASQ2O14958 399 aaPredicted RBP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 KRT13P13646 458 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 ZNF526Q8TF50 670 aaPredicted RBP17.56■□□□□ 0.4
HMGA2-210ENST00000541363 STMN2Q93045 179 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 EXOC1Q9NV70 894 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 MMRN2Q9H8L6 949 aa17.56■□□□□ 0.4
HMGA2-210ENST00000541363 IRX3P78415 501 aaPredicted RBP17.55■□□□□ 0.4
HMGA2-210ENST00000541363 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
HMGA2-210ENST00000541363 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
HMGA2-210ENST00000541363 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 RNF41Q9H4P4 317 aaPredicted RBP17.55■□□□□ 0.4
HMGA2-210ENST00000541363 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 ERCC6LQ2NKX8 1250 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
HMGA2-210ENST00000541363 CRCPO75575 148 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 NAA25Q14CX7 972 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 SEPT14Q6ZU15 432 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 STAC3Q96MF2 364 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 DDX19AQ9NUU7 478 aaKnown RBP17.54■□□□□ 0.4
HMGA2-210ENST00000541363 SETDB1Q15047 1291 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 PFDN4Q9NQP4 134 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 RMND1Q9NWS8 449 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 GNG11P61952 73 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
HMGA2-210ENST00000541363 CYLC1P35663 651 aaPredicted RBP17.54■□□□□ 0.4
HMGA2-210ENST00000541363 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
HMGA2-210ENST00000541363 ATP11AP98196 1134 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
HMGA2-210ENST00000541363 ZNF213O14771 459 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
HMGA2-210ENST00000541363 GUCY1B3Q02153 619 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 TBCAO75347 108 aaKnown RBP17.53■□□□□ 0.4
HMGA2-210ENST00000541363 RFC1P35251 1148 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms