RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MARCH10Q8NA82 808 aaPredicted RBP18.91■□□□□ 0.62
CLPTM1-202ENST00000541297 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
CLPTM1-202ENST00000541297 BCL9O00512 1426 aa18.91■□□□□ 0.62
CLPTM1-202ENST00000541297 ANKRD13DQ6ZTN6 518 aa18.9■□□□□ 0.62
CLPTM1-202ENST00000541297 C9orf78Q9NZ63 289 aaPredicted RBP18.9■□□□□ 0.62
CLPTM1-202ENST00000541297 SPATA31A6Q5VVP1 1343 aa18.9■□□□□ 0.62
CLPTM1-202ENST00000541297 ARFGEF2Q9Y6D5 1785 aa18.9■□□□□ 0.62
CLPTM1-202ENST00000541297 BARGINQ6ZT62 677 aa18.89■□□□□ 0.62
CLPTM1-202ENST00000541297 MYD88Q99836 296 aa18.89■□□□□ 0.61
CLPTM1-202ENST00000541297 EXOC6BQ9Y2D4 811 aa18.89■□□□□ 0.61
CLPTM1-202ENST00000541297 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 USP21Q9UK80 565 aa18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 IGKV5-2P06315 115 aa18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 MEX3CQ5U5Q3 659 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 LINS1Q8NG48 757 aa18.88■□□□□ 0.61
CLPTM1-202ENST00000541297 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 VPS72Q15906 364 aa18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 FNBP4Q8N3X1 1017 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 TBC1D32Q96NH3 1257 aa18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 TBC1D2Q9BYX2 928 aa18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 UPF2Q9HAU5 1272 aaKnown RBP18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-202ENST00000541297 TTLL7Q6ZT98 887 aa18.86■□□□□ 0.61
CLPTM1-202ENST00000541297 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
CLPTM1-202ENST00000541297 METTL22Q9BUU2 404 aaPredicted RBP18.86■□□□□ 0.61
CLPTM1-202ENST00000541297 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 L1TD1Q5T7N2 865 aaKnown RBP18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 RRAGDQ9NQL2 400 aaPredicted RBP18.85■□□□□ 0.61
CLPTM1-202ENST00000541297 GRM8O00222 908 aa18.84■□□□□ 0.61
CLPTM1-202ENST00000541297 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
CLPTM1-202ENST00000541297 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-202ENST00000541297 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
CLPTM1-202ENST00000541297 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-202ENST00000541297 PLBD2Q8NHP8 589 aa18.83■□□□□ 0.61
CLPTM1-202ENST00000541297 JARID2Q92833 1246 aaPredicted RBP18.83■□□□□ 0.61
CLPTM1-202ENST00000541297 ARXQ96QS3 562 aa18.83■□□□□ 0.61
CLPTM1-202ENST00000541297 ZBTB3Q9H5J0 574 aa18.83■□□□□ 0.61
CLPTM1-202ENST00000541297 VSIG10Q8N0Z9 540 aa18.83■□□□□ 0.6
CLPTM1-202ENST00000541297 NUP188Q5SRE5 1749 aa18.82■□□□□ 0.6
CLPTM1-202ENST00000541297 GCKRQ14397 625 aa18.82■□□□□ 0.6
CLPTM1-202ENST00000541297 KCNQ2O43526 872 aa18.81■□□□□ 0.6
CLPTM1-202ENST00000541297 STARD3NLO95772 234 aa18.81■□□□□ 0.6
CLPTM1-202ENST00000541297 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
CLPTM1-202ENST00000541297 SUCLG2Q96I99 432 aa18.81■□□□□ 0.6
CLPTM1-202ENST00000541297 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
CLPTM1-202ENST00000541297 PLEKHM2Q8IWE5 1019 aa18.8■□□□□ 0.6
CLPTM1-202ENST00000541297 AFF2P51816 1311 aa18.8■□□□□ 0.6
CLPTM1-202ENST00000541297 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
CLPTM1-202ENST00000541297 KAZALD1Q96I82 304 aa18.8■□□□□ 0.6
CLPTM1-202ENST00000541297 TJP1Q07157 1748 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 POLA2Q14181 598 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 LRRCC1Q9C099 1032 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 BICC1Q9H694 974 aaKnown RBP18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 EP400Q96L91 3159 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 UTYO14607 1347 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 IBTKQ9P2D0 1353 aaPredicted RBP18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 FAM182BQ5T319 152 aa18.79■□□□□ 0.6
CLPTM1-202ENST00000541297 CYP19A1P11511 503 aaPredicted RBP18.78■□□□□ 0.6
CLPTM1-202ENST00000541297 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLPTM1-202ENST00000541297 UBE3BQ7Z3V4 1068 aa18.78■□□□□ 0.6
CLPTM1-202ENST00000541297 GZF1Q9H116 711 aaPredicted RBP18.77■□□□□ 0.6
CLPTM1-202ENST00000541297 A0A087WZG4 1122 aa18.77■□□□□ 0.59
CLPTM1-202ENST00000541297 MCM4P33991 863 aa18.77■□□□□ 0.59
CLPTM1-202ENST00000541297 IL1RAPL2Q9NP60 686 aa18.77■□□□□ 0.59
CLPTM1-202ENST00000541297 ZBTB1Q9Y2K1 713 aa18.77■□□□□ 0.59
CLPTM1-202ENST00000541297 BMP2KLQ5H9B9 411 aa18.76■□□□□ 0.59
CLPTM1-202ENST00000541297 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
CLPTM1-202ENST00000541297 PA2G4Q9UQ80 394 aaKnown RBP18.76■□□□□ 0.59
CLPTM1-202ENST00000541297 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 HDAC5Q9UQL6 1122 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 MTX1Q13505 466 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 TSHZ3Q63HK5 1081 aa18.75■□□□□ 0.59
CLPTM1-202ENST00000541297 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 LOC102724428A0A0B4J2F2 783 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 SIK1P57059 783 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 KIF6Q6ZMV9 814 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
CLPTM1-202ENST00000541297 FSD2A1L4K1 749 aa18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 C22orf23Q9BZE7 217 aa18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 TTC22Q5TAA0 569 aa18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 PKNOX2Q96KN3 472 aa18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 CWC25Q9NXE8 425 aaPredicted RBP18.73■□□□□ 0.59
CLPTM1-202ENST00000541297 KLHDC4Q8TBB5 520 aa18.72■□□□□ 0.59
CLPTM1-202ENST00000541297 ITPK1Q13572 414 aa18.72■□□□□ 0.59
CLPTM1-202ENST00000541297 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms