RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 NFATC2IPQ8NCF5 419 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 SIN3BO75182 1162 aa11.62□□□□□ -0.55
SMCO2-205ENST00000541168 ZNF232Q9UNY5 417 aa11.62□□□□□ -0.55
SMCO2-205ENST00000541168 GPC6Q9Y625 555 aaPredicted RBP11.62□□□□□ -0.55
SMCO2-205ENST00000541168 PRRT3Q5FWE3 981 aa11.61□□□□□ -0.55
SMCO2-205ENST00000541168 NEUROD4Q9HD90 331 aa11.61□□□□□ -0.55
SMCO2-205ENST00000541168 COG6Q9Y2V7 657 aa11.61□□□□□ -0.55
SMCO2-205ENST00000541168 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
SMCO2-205ENST00000541168 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
SMCO2-205ENST00000541168 ALG2Q9H553 416 aa11.6□□□□□ -0.55
SMCO2-205ENST00000541168 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
SMCO2-205ENST00000541168 TNS4Q8IZW8 715 aa11.59□□□□□ -0.55
SMCO2-205ENST00000541168 SERTM1A2A2V5 107 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 M0R082 166 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
SMCO2-205ENST00000541168 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 ZNF417Q8TAU3 575 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 RHPN1Q8TCX5 695 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 ZNF587Q96SQ5 575 aaPredicted RBP11.58□□□□□ -0.56
SMCO2-205ENST00000541168 SLC30A3Q99726 388 aa11.58□□□□□ -0.56
SMCO2-205ENST00000541168 APBA3O96018 575 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 KRTAP4-8Q9BYQ9 185 aa11.57□□□□□ -0.56
SMCO2-205ENST00000541168 RSPO4Q2I0M5 234 aaPredicted RBP11.56□□□□□ -0.56
SMCO2-205ENST00000541168 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
SMCO2-205ENST00000541168 ALBP02768 609 aa11.55□□□□□ -0.56
SMCO2-205ENST00000541168 SPEM2Q0P670 501 aa11.55□□□□□ -0.56
SMCO2-205ENST00000541168 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
SMCO2-205ENST00000541168 FAM229AH3BQW9 127 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 ADH7P40394 386 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 NEUROD1Q13562 356 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
SMCO2-205ENST00000541168 TRIM50Q86XT4 487 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 TPCN2Q8NHX9 752 aa11.54□□□□□ -0.56
SMCO2-205ENST00000541168 PSMA6P60900 246 aaKnown RBP11.53□□□□□ -0.56
SMCO2-205ENST00000541168 TPSG1Q9NRR2 321 aa11.53□□□□□ -0.56
SMCO2-205ENST00000541168 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
SMCO2-205ENST00000541168 RAB44Q7Z6P3 723 aaPredicted RBP11.52□□□□□ -0.57
SMCO2-205ENST00000541168 MICALL1Q8N3F8 863 aa11.52□□□□□ -0.57
SMCO2-205ENST00000541168 HSH2DQ96JZ2 352 aa11.52□□□□□ -0.57
SMCO2-205ENST00000541168 BRD7Q9NPI1 651 aa11.52□□□□□ -0.57
SMCO2-205ENST00000541168 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
SMCO2-205ENST00000541168 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
SMCO2-205ENST00000541168 CEP63Q96MT8 703 aa11.51□□□□□ -0.57
SMCO2-205ENST00000541168 NACC1Q96RE7 527 aa11.51□□□□□ -0.57
SMCO2-205ENST00000541168 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
SMCO2-205ENST00000541168 KIAA1024Q9UPX6 916 aa11.51□□□□□ -0.57
SMCO2-205ENST00000541168 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
SMCO2-205ENST00000541168 TRIM28Q13263 835 aaKnown RBP11.5□□□□□ -0.57
SMCO2-205ENST00000541168 CHMP3Q9Y3E7 222 aa11.5□□□□□ -0.57
SMCO2-205ENST00000541168 NID1P14543 1247 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 PHACTR1Q9C0D0 580 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 ANKIB1Q9P2G1 1089 aa11.49□□□□□ -0.57
SMCO2-205ENST00000541168 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
SMCO2-205ENST00000541168 DYRK3O43781 588 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 KCNQ4P56696 695 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 TYRO3Q06418 890 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 HCN4Q9Y3Q4 1203 aa11.48□□□□□ -0.57
SMCO2-205ENST00000541168 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 CLDN10P78369 228 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 KCNH4Q9UQ05 1017 aa11.47□□□□□ -0.57
SMCO2-205ENST00000541168 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.57
SMCO2-205ENST00000541168 SFI1A8K8P3 1242 aa11.46□□□□□ -0.57
SMCO2-205ENST00000541168 GRIK4Q16099 956 aa11.46□□□□□ -0.57
SMCO2-205ENST00000541168 C20orf204Q6ZNR8 217 aa11.46□□□□□ -0.57
SMCO2-205ENST00000541168 FOXD4L6Q3SYB3 417 aaPredicted RBP11.45□□□□□ -0.58
SMCO2-205ENST00000541168 FOXD4L3Q6VB84 417 aaPredicted RBP11.45□□□□□ -0.58
SMCO2-205ENST00000541168 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
SMCO2-205ENST00000541168 SUSD3Q96L08 255 aa11.45□□□□□ -0.58
SMCO2-205ENST00000541168 M0R2N6 131 aa11.44□□□□□ -0.58
SMCO2-205ENST00000541168 ADAMTS19Q8TE59 1207 aa11.44□□□□□ -0.58
SMCO2-205ENST00000541168 BHMTQ93088 406 aa11.44□□□□□ -0.58
SMCO2-205ENST00000541168 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
SMCO2-205ENST00000541168 RAD21O60216 631 aa11.43□□□□□ -0.58
SMCO2-205ENST00000541168 LILRB5O75023 590 aa11.43□□□□□ -0.58
SMCO2-205ENST00000541168 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
SMCO2-205ENST00000541168 PPP1R12BO60237 982 aaPredicted RBP11.42□□□□□ -0.58
SMCO2-205ENST00000541168 TBC1D8BQ0IIM8 1120 aa11.42□□□□□ -0.58
SMCO2-205ENST00000541168 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
SMCO2-205ENST00000541168 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
SMCO2-205ENST00000541168 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
SMCO2-205ENST00000541168 PALM3A6NDB9 673 aaPredicted RBP11.41□□□□□ -0.58
SMCO2-205ENST00000541168 TSEN2Q8NCE0 465 aaKnown RBP11.41□□□□□ -0.58
SMCO2-205ENST00000541168 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
SMCO2-205ENST00000541168 C9orf172C9J069 976 aa11.4□□□□□ -0.58
SMCO2-205ENST00000541168 ATP9BO43861 1147 aa11.4□□□□□ -0.58
SMCO2-205ENST00000541168 PRSS36Q5K4E3 855 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms