RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
TTC39C-203ENST00000540918 ZFYVE9O95405 1425 aa11.38□□□□□ -0.59
TTC39C-203ENST00000540918 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
TTC39C-203ENST00000540918 TFCP2Q12800 502 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 NECAB1Q8N987 351 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 DCTPP1Q9H773 170 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 ZNF652Q9Y2D9 606 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 HIP1O00291 1037 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 SLC52A2Q9HAB3 445 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 SDF4Q9BRK5 362 aa11.37□□□□□ -0.59
TTC39C-203ENST00000540918 BCORL1Q5H9F3 1711 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
TTC39C-203ENST00000540918 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 A2ML1A8K2U0 1454 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 KIAA2012Q0VF49 1180 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 GOLGA6L6A8MZA4 724 aa11.36□□□□□ -0.59
TTC39C-203ENST00000540918 ZNF622Q969S3 477 aaKnown RBP eCLIP11.35□□□□□ -0.59
TTC39C-203ENST00000540918 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
TTC39C-203ENST00000540918 GNPATO15228 680 aa11.35□□□□□ -0.59
TTC39C-203ENST00000540918 SUCLG2Q96I99 432 aa11.35□□□□□ -0.59
TTC39C-203ENST00000540918 GOLGA6L19H0YKK7 550 aa11.35□□□□□ -0.59
TTC39C-203ENST00000540918 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
TTC39C-203ENST00000540918 TFIP11Q9UBB9 837 aaKnown RBP11.35□□□□□ -0.59
TTC39C-203ENST00000540918 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
TTC39C-203ENST00000540918 MCM4P33991 863 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
TTC39C-203ENST00000540918 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC39C-203ENST00000540918 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 USP44Q9H0E7 712 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 NPHP4O75161 1426 aaPredicted RBP11.34□□□□□ -0.59
TTC39C-203ENST00000540918 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
TTC39C-203ENST00000540918 TAF5LO75529 589 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 PHKG2P15735 406 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 PTMSP20962 102 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 NAPBQ9H115 298 aa11.34□□□□□ -0.59
TTC39C-203ENST00000540918 PCDH11XQ9BZA7 1347 aa11.33□□□□□ -0.59
TTC39C-203ENST00000540918 PCDH11YQ9BZA8 1340 aa11.33□□□□□ -0.59
TTC39C-203ENST00000540918 NRDCO43847 1150 aa11.33□□□□□ -0.59
TTC39C-203ENST00000540918 SKOR2Q2VWA4 1001 aaPredicted RBP11.33□□□□□ -0.59
TTC39C-203ENST00000540918 ATP2B3Q16720 1220 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
TTC39C-203ENST00000540918 DBNDD2Q9BQY9 259 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 USP6P35125 1406 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
TTC39C-203ENST00000540918 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
TTC39C-203ENST00000540918 ME1P48163 572 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 CAMK4Q16566 473 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
TTC39C-203ENST00000540918 CCDC73Q6ZRK6 1079 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 TFCP2L1Q9NZI6 479 aa11.33□□□□□ -0.6
TTC39C-203ENST00000540918 NSFL1CQ9UNZ2 370 aaKnown RBP11.33□□□□□ -0.6
TTC39C-203ENST00000540918 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 CCDC69A6NI79 296 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
TTC39C-203ENST00000540918 BRINP3Q76B58 766 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 ALDH1L1O75891 902 aa11.32□□□□□ -0.6
TTC39C-203ENST00000540918 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
TTC39C-203ENST00000540918 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
TTC39C-203ENST00000540918 MYOM2P54296 1465 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 SLC5A1P13866 664 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 USP5P45974 858 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 STK38Q15208 465 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
TTC39C-203ENST00000540918 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
TTC39C-203ENST00000540918 BRF1Q92994 677 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 USP21Q9UK80 565 aa11.31□□□□□ -0.6
TTC39C-203ENST00000540918 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
TTC39C-203ENST00000540918 ZNF213O14771 459 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 MCM2P49736 904 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
TTC39C-203ENST00000540918 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
TTC39C-203ENST00000540918 INSRP06213 1382 aa11.3□□□□□ -0.6
TTC39C-203ENST00000540918 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
TTC39C-203ENST00000540918 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms