RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 EDARADDQ8WWZ3 215 aa8.65□□□□□ -1.02
SOX9-AS1-214ENST00000540802 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 DPYDQ12882 1025 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 LRRC69Q6ZNQ3 347 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 SLCO4C1Q6ZQN7 724 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ANKMY2Q8IV38 441 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 BEND7Q8N7W2 519 aaPredicted RBP8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L21D6R901 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 CD33P20138 364 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 C2orf49Q9BVC5 232 aaPredicted RBP8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 STRN4Q9NRL3 753 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 DNMT3AQ9Y6K1 912 aaPredicted RBP8.63□□□□□ -1.03
SOX9-AS1-214ENST00000540802 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
SOX9-AS1-214ENST00000540802 SCG3Q8WXD2 468 aaKnown RBP8.62□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ARXQ96QS3 562 aa8.62□□□□□ -1.03
SOX9-AS1-214ENST00000540802 PHACTR1Q9C0D0 580 aa8.62□□□□□ -1.03
SOX9-AS1-214ENST00000540802 KLF15Q9UIH9 416 aa8.62□□□□□ -1.03
SOX9-AS1-214ENST00000540802 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
SOX9-AS1-214ENST00000540802 EPXP11678 715 aa8.61□□□□□ -1.03
SOX9-AS1-214ENST00000540802 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
SOX9-AS1-214ENST00000540802 NEUROD4Q9HD90 331 aa8.61□□□□□ -1.03
SOX9-AS1-214ENST00000540802 NEURL1BA8MQ27 555 aa8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 SNRPNP63162 240 aaKnown RBP8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
SOX9-AS1-214ENST00000540802 IGFBP4P22692 258 aa8.59□□□□□ -1.03
SOX9-AS1-214ENST00000540802 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
SOX9-AS1-214ENST00000540802 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
SOX9-AS1-214ENST00000540802 ADH6P28332 368 aa8.58□□□□□ -1.04
SOX9-AS1-214ENST00000540802 ZNF468Q5VIY5 522 aaPredicted RBP8.58□□□□□ -1.04
SOX9-AS1-214ENST00000540802 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
SOX9-AS1-214ENST00000540802 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SUSD3Q96L08 255 aa8.58□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
SOX9-AS1-214ENST00000540802 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
SOX9-AS1-214ENST00000540802 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
SOX9-AS1-214ENST00000540802 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
SOX9-AS1-214ENST00000540802 WEE1P30291 646 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 KCNQ4P56696 695 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 LINC00114Q6XXX2 140 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 FAM200AQ8TCP9 573 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 MDFIQ99750 246 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 MKL2Q9ULH7 1088 aa8.56□□□□□ -1.04
SOX9-AS1-214ENST00000540802 LGR5O75473 907 aa8.55□□□□□ -1.04
SOX9-AS1-214ENST00000540802 RFX1P22670 979 aa8.55□□□□□ -1.04
SOX9-AS1-214ENST00000540802 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
SOX9-AS1-214ENST00000540802 TYRO3Q06418 890 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 HIF1AQ16665 826 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 RTN1Q16799 776 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 CEP63Q96MT8 703 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 BRD7Q9NPI1 651 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SIN3BO75182 1162 aa8.53□□□□□ -1.04
SOX9-AS1-214ENST00000540802 AMPD1P23109 780 aa8.53□□□□□ -1.04
SOX9-AS1-214ENST00000540802 ELOAQ14241 798 aaKnown RBP8.53□□□□□ -1.04
SOX9-AS1-214ENST00000540802 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
SOX9-AS1-214ENST00000540802 NGLY1Q96IV0 654 aa8.53□□□□□ -1.04
SOX9-AS1-214ENST00000540802 FOXO3O43524 673 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 DGKGP49619 791 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 IER5Q5VY09 327 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 CHSY3Q70JA7 882 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 NOVA2Q9UNW9 492 aaKnown RBP8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 KCNH4Q9UQ05 1017 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ELOA3DA6NLF2 546 aaPredicted RBP8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ELOA3BQ3SY89 546 aa8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ELOA3Q8NG57 546 aa8.51□□□□□ -1.05
SOX9-AS1-214ENST00000540802 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
SOX9-AS1-214ENST00000540802 IGHA1P01876 353 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms