RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
C2CD3-215ENST00000540452 C9orf78Q9NZ63 289 aaPredicted RBP10.26□□□□□ -0.77
C2CD3-215ENST00000540452 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
C2CD3-215ENST00000540452 USP42Q9H9J4 1324 aaKnown RBP10.26□□□□□ -0.77
C2CD3-215ENST00000540452 ANKRD36CQ5JPF3 1778 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 RGL2O15211 777 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 STARD3NLO95772 234 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 RXRBP28702 533 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
C2CD3-215ENST00000540452 TRIM28Q13263 835 aaKnown RBP10.25□□□□□ -0.77
C2CD3-215ENST00000540452 PROSER3Q2NL68 480 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 XAGE3Q8WTP9 111 aa10.25□□□□□ -0.77
C2CD3-215ENST00000540452 TJP1Q07157 1748 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 PNMA6EA0A0J9YXQ4 647 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 NBPF7P0C2Y1 421 aaPredicted RBP10.24□□□□□ -0.77
C2CD3-215ENST00000540452 GCKRQ14397 625 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 BECN1Q14457 450 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 VPS72Q15906 364 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 RABL6Q3YEC7 729 aaPredicted RBP10.24□□□□□ -0.77
C2CD3-215ENST00000540452 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 FNBP4Q8N3X1 1017 aaPredicted RBP10.24□□□□□ -0.77
C2CD3-215ENST00000540452 CCDC191Q8NCU4 936 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 DDX54Q8TDD1 881 aaKnown RBP10.24□□□□□ -0.77
C2CD3-215ENST00000540452 TTC41PQ6P2S7 1318 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
C2CD3-215ENST00000540452 AK9Q5TCS8 1911 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 IGKV5-2P06315 115 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 PDE1AP54750 535 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 DDB1Q16531 1140 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
C2CD3-215ENST00000540452 ANXA1P04083 346 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 MX1P20591 662 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 HSP90AB3PQ58FF7 597 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 RHPN1Q8TCX5 695 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 PIGBQ92521 554 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
C2CD3-215ENST00000540452 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
C2CD3-215ENST00000540452 REC8O95072 547 aa10.21□□□□□ -0.77
C2CD3-215ENST00000540452 MYL6BP14649 208 aa10.21□□□□□ -0.77
C2CD3-215ENST00000540452 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.77
C2CD3-215ENST00000540452 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
C2CD3-215ENST00000540452 C22orf23Q9BZE7 217 aa10.21□□□□□ -0.77
C2CD3-215ENST00000540452 COPRSQ9NQ92 184 aa10.21□□□□□ -0.77
C2CD3-215ENST00000540452 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
C2CD3-215ENST00000540452 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.78
C2CD3-215ENST00000540452 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 ERVV-1B6SEH8 477 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 ERC2O15083 957 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 HMGB2P26583 209 aaKnown RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 IL6STP40189 918 aaPredicted RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 CWF19L2Q2TBE0 894 aaKnown RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 NBPF14Q5TI25 921 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 MYD88Q99836 296 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 CWC25Q9NXE8 425 aaPredicted RBP10.2□□□□□ -0.78
C2CD3-215ENST00000540452 EXOC6BQ9Y2D4 811 aa10.2□□□□□ -0.78
C2CD3-215ENST00000540452 MYH3P11055 1940 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 NHSQ6T4R5 1651 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 H7C1W4 665 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 GLRX3O76003 335 aaKnown RBP10.19□□□□□ -0.78
C2CD3-215ENST00000540452 SEC24BO95487 1268 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 CASP7P55210 303 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
C2CD3-215ENST00000540452 KIF6Q6ZMV9 814 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
C2CD3-215ENST00000540452 IL17RAQ96F46 866 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 AK7Q96M32 723 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 PLA2G12BQ9BX93 195 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 BICC1Q9H694 974 aaKnown RBP10.19□□□□□ -0.78
C2CD3-215ENST00000540452 USP35Q9P2H5 1018 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 NUP98P52948 1817 aa10.19□□□□□ -0.78
C2CD3-215ENST00000540452 RFX7Q2KHR2 1363 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 CDHR2Q9BYE9 1310 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 PTCD1O75127 700 aaKnown RBP10.18□□□□□ -0.78
C2CD3-215ENST00000540452 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
C2CD3-215ENST00000540452 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
C2CD3-215ENST00000540452 SDSP20132 328 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 TCIRG1Q13488 830 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
C2CD3-215ENST00000540452 SNX21Q969T3 373 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 KAZALD1Q96I82 304 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 SUCLG2Q96I99 432 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 ISCA1Q9BUE6 129 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 GPR108Q9NPR9 543 aa10.18□□□□□ -0.78
C2CD3-215ENST00000540452 ASAP1Q9ULH1 1129 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms