RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 KCNB2Q92953 911 aa8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 ZSCAN31Q96LW9 406 aaPredicted RBP8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 CCDC171Q6TFL3 1326 aa8.53□□□□□ -1.04
PPFIBP1-211ENST00000540256 MON2Q7Z3U7 1717 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 SNPHO15079 494 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 HMOX1P09601 288 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 ZSCAN22P10073 491 aaPredicted RBP8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 ZSCAN20P17040 1043 aaPredicted RBP8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 TAF3Q5VWG9 929 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 KIAA1524Q8TCG1 905 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 MEIS3Q99687 375 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 FUCA2Q9BTY2 467 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 USP42Q9H9J4 1324 aaKnown RBP8.52□□□□□ -1.05
PPFIBP1-211ENST00000540256 MSH6P52701 1360 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 USP31Q70CQ4 1352 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 KIF3CO14782 793 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 ADCY5O95622 1261 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 SAFB2Q14151 953 aaKnown RBP eCLIP8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 AEBP1Q8IUX7 1158 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 ANKRD7Q92527 254 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 TTC14Q96N46 770 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 ALDH8A1Q9H2A2 487 aaPredicted RBP8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 SH2B1Q9NRF2 756 aaPredicted RBP8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 LIMCH1Q9UPQ0 1083 aa8.51□□□□□ -1.05
PPFIBP1-211ENST00000540256 AK9Q5TCS8 1911 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 SETD1AO15047 1707 aaKnown RBP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 RGPD1P0DJD0 1748 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 CHAF1AQ13111 956 aaPredicted RBP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 SSH3Q8TE77 659 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 AKAP12Q02952 1782 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 ARHGAP23Q9P227 1491 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 ELP1O95163 1332 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 RAD50Q92878 1312 aa8.5□□□□□ -1.05
PPFIBP1-211ENST00000540256 KDRP35968 1356 aa8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 SGSM2O43147 1006 aa8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 STX6O43752 255 aa8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 GADD45BO75293 160 aaPredicted RBP8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 HSP90AB4PQ58FF6 505 aa8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 CCDC30Q5VVM6 783 aa8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 RTF1Q92541 710 aaKnown RBP8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
PPFIBP1-211ENST00000540256 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 F13A1P00488 732 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 CCDC192P0DO97 292 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 EIF4A2Q14240 407 aaKnown RBP8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 DNTTIP2Q5QJE6 756 aaKnown RBP8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 VPS53Q5VIR6 699 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 NME9Q86XW9 330 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 CREBRFQ8IUR6 639 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 THEMISQ8N1K5 641 aaPredicted RBP8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 RNF214Q8ND24 703 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 STK31Q9BXU1 1019 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 ANO2Q9NQ90 1003 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 PALD1Q9ULE6 856 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 PAXBP1Q9Y5B6 917 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 TTC41PQ6P2S7 1318 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
PPFIBP1-211ENST00000540256 OVOS2A0A0J9YW53 1432 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 OVOS2Q6IE36 1432 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 ADGRL3Q9HAR2 1447 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 ITSN1Q15811 1721 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 NEMFO60524 1076 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 HOXB3P14651 431 aaPredicted RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 PDCP20941 246 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 SYT1P21579 422 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 CDC25BP30305 580 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 GABPB1Q06547 395 aaPredicted RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 SULT6B1Q6IMI4 303 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 RBM43Q6ZSC3 357 aaKnown RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 FAM200AQ8TCP9 573 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 LSG1Q9H089 658 aaKnown RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 SNRKQ9NRH2 765 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 OGFRQ9NZT2 677 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 SMC3Q9UQE7 1217 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 CPS1P31327 1500 aa8.47□□□□□ -1.05
PPFIBP1-211ENST00000540256 FAM83GA6ND36 823 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms