RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 UNC5CLQ8IV45 518 aa21.15■□□□□ 0.98
LTBR-207ENST00000539925 ATG3Q9NT62 314 aa21.15■□□□□ 0.98
LTBR-207ENST00000539925 PDE1AP54750 535 aa21.15■□□□□ 0.98
LTBR-207ENST00000539925 STAP2Q9UGK3 403 aa21.15■□□□□ 0.98
LTBR-207ENST00000539925 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
LTBR-207ENST00000539925 APBB1O00213 710 aa21.14■□□□□ 0.97
LTBR-207ENST00000539925 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
LTBR-207ENST00000539925 BECN1Q14457 450 aa21.14■□□□□ 0.97
LTBR-207ENST00000539925 NBPF14Q5TI25 921 aa21.14■□□□□ 0.97
LTBR-207ENST00000539925 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
LTBR-207ENST00000539925 NBPF15Q8N660 670 aa21.14■□□□□ 0.97
LTBR-207ENST00000539925 SALL3Q9BXA9 1300 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
LTBR-207ENST00000539925 MX1P20591 662 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 C16orf71Q8IYS4 520 aaPredicted RBP21.12■□□□□ 0.97
LTBR-207ENST00000539925 RHPN1Q8TCX5 695 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 C22orf23Q9BZE7 217 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
LTBR-207ENST00000539925 VPS72Q15906 364 aa21.12■□□□□ 0.97
LTBR-207ENST00000539925 ITGB4P16144 1822 aa21.11■□□□□ 0.97
LTBR-207ENST00000539925 A1BGP04217 495 aa21.11■□□□□ 0.97
LTBR-207ENST00000539925 TBC1D9Q6ZT07 1266 aa21.11■□□□□ 0.97
LTBR-207ENST00000539925 CCDC191Q8NCU4 936 aa21.11■□□□□ 0.97
LTBR-207ENST00000539925 SUCLG2Q96I99 432 aa21.11■□□□□ 0.97
LTBR-207ENST00000539925 CCDC9Q9Y3X0 531 aaKnown RBP21.11■□□□□ 0.97
LTBR-207ENST00000539925 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
LTBR-207ENST00000539925 ARFGEF2Q9Y6D5 1785 aa21.1■□□□□ 0.97
LTBR-207ENST00000539925 RBM25P49756 843 aaKnown RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
LTBR-207ENST00000539925 CWC25Q9NXE8 425 aaPredicted RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 KIF6Q6ZMV9 814 aa21.09■□□□□ 0.97
LTBR-207ENST00000539925 CLASRPQ8N2M8 674 aaKnown RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 FNBP4Q8N3X1 1017 aaPredicted RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 NGLY1Q96IV0 654 aa21.09■□□□□ 0.97
LTBR-207ENST00000539925 RBM42Q9BTD8 480 aaKnown RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 BICC1Q9H694 974 aaKnown RBP21.09■□□□□ 0.97
LTBR-207ENST00000539925 SDSP20132 328 aa21.08■□□□□ 0.96
LTBR-207ENST00000539925 TRIM28Q13263 835 aaKnown RBP21.08■□□□□ 0.96
LTBR-207ENST00000539925 OTUD7AQ8TE49 926 aaPredicted RBP21.08■□□□□ 0.96
LTBR-207ENST00000539925 A0A087WZG4 1122 aa21.07■□□□□ 0.96
LTBR-207ENST00000539925 PRIM1P49642 420 aaKnown RBP21.07■□□□□ 0.96
LTBR-207ENST00000539925 G3BP1Q13283 466 aaKnown RBP eCLIP21.07■□□□□ 0.96
LTBR-207ENST00000539925 RABL6Q3YEC7 729 aaPredicted RBP21.07■□□□□ 0.96
LTBR-207ENST00000539925 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
LTBR-207ENST00000539925 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
LTBR-207ENST00000539925 KAZALD1Q96I82 304 aa21.07■□□□□ 0.96
LTBR-207ENST00000539925 H7C1W4 665 aa21.06■□□□□ 0.96
LTBR-207ENST00000539925 PIP4K2AP48426 406 aaPredicted RBP21.06■□□□□ 0.96
LTBR-207ENST00000539925 HSP90AB3PQ58FF7 597 aa21.06■□□□□ 0.96
LTBR-207ENST00000539925 SMARCC1Q92922 1105 aaPredicted RBP21.06■□□□□ 0.96
LTBR-207ENST00000539925 TTC41PQ6P2S7 1318 aa21.06■□□□□ 0.96
LTBR-207ENST00000539925 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
LTBR-207ENST00000539925 TTLL7Q6ZT98 887 aa21.05■□□□□ 0.96
LTBR-207ENST00000539925 SYTL4Q96C24 671 aaPredicted RBP21.05■□□□□ 0.96
LTBR-207ENST00000539925 NUP188Q5SRE5 1749 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 ERC2O15083 957 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 REC8O95072 547 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 CYP19A1P11511 503 aaPredicted RBP21.04■□□□□ 0.96
LTBR-207ENST00000539925 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 BCL9LQ86UU0 1499 aa21.04■□□□□ 0.96
LTBR-207ENST00000539925 UBE3BQ7Z3V4 1068 aa21.03■□□□□ 0.96
LTBR-207ENST00000539925 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
LTBR-207ENST00000539925 COPRSQ9NQ92 184 aa21.03■□□□□ 0.96
LTBR-207ENST00000539925 DOT1LQ8TEK3 1739 aa21.03■□□□□ 0.96
LTBR-207ENST00000539925 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
LTBR-207ENST00000539925 CASP7P55210 303 aa21.02■□□□□ 0.96
LTBR-207ENST00000539925 ISCA1Q9BUE6 129 aa21.02■□□□□ 0.96
LTBR-207ENST00000539925 IL1RAPL2Q9NP60 686 aa21.02■□□□□ 0.96
LTBR-207ENST00000539925 AFDNP55196 1824 aaKnown RBP21.02■□□□□ 0.96
LTBR-207ENST00000539925 ATP5J2-PTCD1G3V325 749 aa21.02■□□□□ 0.95
LTBR-207ENST00000539925 MAP3K15Q6ZN16 1313 aa21.01■□□□□ 0.95
LTBR-207ENST00000539925 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.01■□□□□ 0.95
LTBR-207ENST00000539925 EPB41L2O43491 1005 aaKnown RBP21.01■□□□□ 0.95
LTBR-207ENST00000539925 GLRX3O76003 335 aaKnown RBP21.01■□□□□ 0.95
LTBR-207ENST00000539925 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
LTBR-207ENST00000539925 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
LTBR-207ENST00000539925 ZBTB3Q9H5J0 574 aa21.01■□□□□ 0.95
LTBR-207ENST00000539925 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
LTBR-207ENST00000539925 IFIT2P09913 472 aaKnown RBP21■□□□□ 0.95
LTBR-207ENST00000539925 GIGYF2Q6Y7W6 1299 aaKnown RBP20.99■□□□□ 0.95
LTBR-207ENST00000539925 CICQ96RK0 1608 aaPredicted RBP20.99■□□□□ 0.95
LTBR-207ENST00000539925 CNTROBQ8N137 903 aa20.98■□□□□ 0.95
LTBR-207ENST00000539925 ECHDC1Q9NTX5 307 aa20.98■□□□□ 0.95
LTBR-207ENST00000539925 USP21Q9UK80 565 aa20.98■□□□□ 0.95
LTBR-207ENST00000539925 PCCAP05165 728 aaPredicted RBP20.97■□□□□ 0.95
LTBR-207ENST00000539925 FAM98CQ17RN3 349 aaKnown RBP20.97■□□□□ 0.95
LTBR-207ENST00000539925 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
LTBR-207ENST00000539925 IL27Q8NEV9 243 aa20.97■□□□□ 0.95
LTBR-207ENST00000539925 PA2G4Q9UQ80 394 aaKnown RBP20.97■□□□□ 0.95
LTBR-207ENST00000539925 TRIM6-TRIM34B2RNG4 842 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 EPHA10Q5JZY3 1008 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 PI4K2BQ8TCG2 481 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 SLC4A9Q96Q91 983 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 PLA2G12BQ9BX93 195 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 KAT6BQ8WYB5 2073 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 LOC102724428A0A0B4J2F2 783 aa20.96■□□□□ 0.95
LTBR-207ENST00000539925 RFX5P48382 616 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms