RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 CAMTA2O94983 1202 aa19.07■□□□□ 0.64
PBX3-212ENST00000538998 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
PBX3-212ENST00000538998 TAF1DQ9H5J8 278 aaPredicted RBP19.07■□□□□ 0.64
PBX3-212ENST00000538998 TMEM88BA6NKF7 163 aa19.06■□□□□ 0.64
PBX3-212ENST00000538998 GNAT3A8MTJ3 354 aa19.06■□□□□ 0.64
PBX3-212ENST00000538998 CTCFP49711 727 aaPredicted RBP19.06■□□□□ 0.64
PBX3-212ENST00000538998 GAS2L2Q8NHY3 880 aa19.06■□□□□ 0.64
PBX3-212ENST00000538998 SLX4Q8IY92 1834 aa19.05■□□□□ 0.64
PBX3-212ENST00000538998 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
PBX3-212ENST00000538998 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
PBX3-212ENST00000538998 ARFGEF2Q9Y6D5 1785 aa19.05■□□□□ 0.64
PBX3-212ENST00000538998 SCN4AP35499 1836 aa19.04■□□□□ 0.64
PBX3-212ENST00000538998 A1BGP04217 495 aa19.04■□□□□ 0.64
PBX3-212ENST00000538998 VEGFBP49765 207 aa19.04■□□□□ 0.64
PBX3-212ENST00000538998 DZIP3Q86Y13 1208 aaKnown RBP19.04■□□□□ 0.64
PBX3-212ENST00000538998 NBPF5PQ86XG9 351 aaPredicted RBP19.03■□□□□ 0.64
PBX3-212ENST00000538998 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
PBX3-212ENST00000538998 BCORQ6W2J9 1755 aa19.02■□□□□ 0.64
PBX3-212ENST00000538998 ITGBL1O95965 494 aaPredicted RBP19.02■□□□□ 0.64
PBX3-212ENST00000538998 NPR1P16066 1061 aa19.02■□□□□ 0.64
PBX3-212ENST00000538998 FKBP4Q02790 459 aaKnown RBP eCLIP19.02■□□□□ 0.64
PBX3-212ENST00000538998 EAPPQ56P03 285 aaPredicted RBP19.02■□□□□ 0.64
PBX3-212ENST00000538998 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
PBX3-212ENST00000538998 HACL1Q9UJ83 578 aa19.02■□□□□ 0.64
PBX3-212ENST00000538998 SIPA1L3O60292 1781 aaPredicted RBP19.01■□□□□ 0.63
PBX3-212ENST00000538998 WBP1LQ9NX94 342 aa19.01■□□□□ 0.63
PBX3-212ENST00000538998 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
PBX3-212ENST00000538998 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
PBX3-212ENST00000538998 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
PBX3-212ENST00000538998 PNMA8AQ86V59 439 aaPredicted RBP19■□□□□ 0.63
PBX3-212ENST00000538998 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
PBX3-212ENST00000538998 CACNA1SQ13698 1873 aa19■□□□□ 0.63
PBX3-212ENST00000538998 COL3A1P02461 1466 aaPredicted RBP18.99■□□□□ 0.63
PBX3-212ENST00000538998 KLRG2A4D1S0 409 aaPredicted RBP18.99■□□□□ 0.63
PBX3-212ENST00000538998 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
PBX3-212ENST00000538998 U2SURPO15042 1029 aaKnown RBP18.99■□□□□ 0.63
PBX3-212ENST00000538998 EPHX2P34913 555 aa18.99■□□□□ 0.63
PBX3-212ENST00000538998 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
PBX3-212ENST00000538998 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
PBX3-212ENST00000538998 RASSF10A6NK89 507 aa18.98■□□□□ 0.63
PBX3-212ENST00000538998 LBX1P52954 281 aa18.98■□□□□ 0.63
PBX3-212ENST00000538998 CC2D1BQ5T0F9 858 aaKnown RBP18.98■□□□□ 0.63
PBX3-212ENST00000538998 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
PBX3-212ENST00000538998 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
PBX3-212ENST00000538998 RGL2O15211 777 aa18.97■□□□□ 0.63
PBX3-212ENST00000538998 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
PBX3-212ENST00000538998 DEFB115Q30KQ5 88 aa18.97■□□□□ 0.63
PBX3-212ENST00000538998 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
PBX3-212ENST00000538998 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
PBX3-212ENST00000538998 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
PBX3-212ENST00000538998 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
PBX3-212ENST00000538998 CNTROBQ8N137 903 aa18.96■□□□□ 0.63
PBX3-212ENST00000538998 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
PBX3-212ENST00000538998 FZD9O00144 591 aa18.95■□□□□ 0.62
PBX3-212ENST00000538998 KCNQ3O43525 872 aa18.95■□□□□ 0.62
PBX3-212ENST00000538998 IARSP41252 1262 aaKnown RBP18.95■□□□□ 0.62
PBX3-212ENST00000538998 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
PBX3-212ENST00000538998 GPC2Q8N158 579 aa18.95■□□□□ 0.62
PBX3-212ENST00000538998 HSPA8P11142 646 aaKnown RBP18.94■□□□□ 0.62
PBX3-212ENST00000538998 ALDH1B1P30837 517 aa18.94■□□□□ 0.62
PBX3-212ENST00000538998 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
PBX3-212ENST00000538998 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
PBX3-212ENST00000538998 WDR33Q9C0J8 1336 aaKnown RBP18.94■□□□□ 0.62
PBX3-212ENST00000538998 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
PBX3-212ENST00000538998 OLFM4Q6UX06 510 aa18.93■□□□□ 0.62
PBX3-212ENST00000538998 JDP2Q8WYK2 163 aa18.93■□□□□ 0.62
PBX3-212ENST00000538998 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
PBX3-212ENST00000538998 ABT1Q9ULW3 272 aaKnown RBP18.93■□□□□ 0.62
PBX3-212ENST00000538998 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
PBX3-212ENST00000538998 SYNE4Q8N205 404 aa18.92■□□□□ 0.62
PBX3-212ENST00000538998 PSMD1Q99460 953 aa18.92■□□□□ 0.62
PBX3-212ENST00000538998 PRAMEF22A3QJZ6 481 aa18.91■□□□□ 0.62
PBX3-212ENST00000538998 PHACTR3Q96KR7 559 aa18.91■□□□□ 0.62
PBX3-212ENST00000538998 SLC34A2O95436 690 aa18.9■□□□□ 0.62
PBX3-212ENST00000538998 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
PBX3-212ENST00000538998 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
PBX3-212ENST00000538998 DDX21Q9NR30 783 aaKnown RBP eCLIP18.9■□□□□ 0.62
PBX3-212ENST00000538998 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
PBX3-212ENST00000538998 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.61
PBX3-212ENST00000538998 EIF6P56537 245 aaKnown RBP18.89■□□□□ 0.61
PBX3-212ENST00000538998 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
PBX3-212ENST00000538998 RTF1Q92541 710 aaKnown RBP18.89■□□□□ 0.61
PBX3-212ENST00000538998 RSPH6AQ9H0K4 717 aa18.89■□□□□ 0.61
PBX3-212ENST00000538998 SNED1Q8TER0 1413 aa18.89■□□□□ 0.61
PBX3-212ENST00000538998 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
PBX3-212ENST00000538998 CRY2Q49AN0 593 aa18.88■□□□□ 0.61
PBX3-212ENST00000538998 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
PBX3-212ENST00000538998 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
PBX3-212ENST00000538998 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
PBX3-212ENST00000538998 ECE1P42892 770 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 THSD7BQ9C0I4 1608 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 NYXQ9GZU5 481 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 GJA3Q9Y6H8 435 aa18.87■□□□□ 0.61
PBX3-212ENST00000538998 MCM10Q7L590 875 aa18.86■□□□□ 0.61
PBX3-212ENST00000538998 HLFQ16534 295 aa18.85■□□□□ 0.61
PBX3-212ENST00000538998 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
PBX3-212ENST00000538998 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms