RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
ACTN1-205ENST00000538545 ALDH1L1O75891 902 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 MX1P20591 662 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
ACTN1-205ENST00000538545 GCKRQ14397 625 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
ACTN1-205ENST00000538545 EXOC5O00471 708 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 CDC45O75419 566 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 NEXNQ0ZGT2 675 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 EP400Q96L91 3159 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
ACTN1-205ENST00000538545 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
ACTN1-205ENST00000538545 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
ACTN1-205ENST00000538545 TOM1O60784 492 aa17.42■□□□□ 0.38
ACTN1-205ENST00000538545 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
ACTN1-205ENST00000538545 MYT1Q01538 1121 aa17.42■□□□□ 0.38
ACTN1-205ENST00000538545 A0A087WZG4 1122 aa17.41■□□□□ 0.38
ACTN1-205ENST00000538545 DISP2A7MBM2 1401 aa17.4■□□□□ 0.38
ACTN1-205ENST00000538545 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
ACTN1-205ENST00000538545 ITGB4P16144 1822 aa17.4■□□□□ 0.38
ACTN1-205ENST00000538545 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
ACTN1-205ENST00000538545 CD2BP2O95400 341 aaKnown RBP17.39■□□□□ 0.37
ACTN1-205ENST00000538545 KIF2CQ99661 725 aa17.39■□□□□ 0.37
ACTN1-205ENST00000538545 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
ACTN1-205ENST00000538545 AFDNP55196 1824 aaKnown RBP17.39■□□□□ 0.37
ACTN1-205ENST00000538545 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
ACTN1-205ENST00000538545 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
ACTN1-205ENST00000538545 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
ACTN1-205ENST00000538545 IL25Q9H293 177 aa17.38■□□□□ 0.37
ACTN1-205ENST00000538545 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
ACTN1-205ENST00000538545 DDB1Q16531 1140 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 SASH1O94885 1247 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 MTX1Q13505 466 aa17.37■□□□□ 0.37
ACTN1-205ENST00000538545 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-205ENST00000538545 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
ACTN1-205ENST00000538545 LAMB4A4D0S4 1761 aa17.36■□□□□ 0.37
ACTN1-205ENST00000538545 UTYO14607 1347 aa17.36■□□□□ 0.37
ACTN1-205ENST00000538545 FAM98CQ17RN3 349 aaKnown RBP17.36■□□□□ 0.37
ACTN1-205ENST00000538545 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
ACTN1-205ENST00000538545 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
ACTN1-205ENST00000538545 TLR7Q9NYK1 1049 aaKnown RBP17.36■□□□□ 0.37
ACTN1-205ENST00000538545 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
ACTN1-205ENST00000538545 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
ACTN1-205ENST00000538545 KCNQ2O43526 872 aa17.35■□□□□ 0.37
ACTN1-205ENST00000538545 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
ACTN1-205ENST00000538545 KCNQ4P56696 695 aa17.35■□□□□ 0.37
ACTN1-205ENST00000538545 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
ACTN1-205ENST00000538545 PAPPAQ13219 1627 aa17.35■□□□□ 0.37
ACTN1-205ENST00000538545 RAB11FIP3O75154 756 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 NGLY1Q96IV0 654 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 GPTP24298 496 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 BCL9O00512 1426 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 BECN1Q14457 450 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 HLFQ16534 295 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 PTF1AQ7RTS3 328 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 AACSQ86V21 672 aa17.34■□□□□ 0.37
ACTN1-205ENST00000538545 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
ACTN1-205ENST00000538545 CASP7P55210 303 aa17.33■□□□□ 0.36
ACTN1-205ENST00000538545 USP26Q9BXU7 913 aa17.33■□□□□ 0.36
ACTN1-205ENST00000538545 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.367e-8■■□□□ 12.9
ACTN1-205ENST00000538545 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
ACTN1-205ENST00000538545 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
ACTN1-205ENST00000538545 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
ACTN1-205ENST00000538545 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
ACTN1-205ENST00000538545 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
ACTN1-205ENST00000538545 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
ACTN1-205ENST00000538545 ZNF594Q96JF6 807 aaPredicted RBP17.32■□□□□ 0.36
ACTN1-205ENST00000538545 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
ACTN1-205ENST00000538545 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
ACTN1-205ENST00000538545 DOT1LQ8TEK3 1739 aa17.31■□□□□ 0.36
ACTN1-205ENST00000538545 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
ACTN1-205ENST00000538545 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
ACTN1-205ENST00000538545 CHMLP26374 656 aa17.3■□□□□ 0.36
ACTN1-205ENST00000538545 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-205ENST00000538545 NRAPQ86VF7 1730 aa17.3■□□□□ 0.36
ACTN1-205ENST00000538545 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
ACTN1-205ENST00000538545 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
ACTN1-205ENST00000538545 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
ACTN1-205ENST00000538545 STARD3NLO95772 234 aa17.29■□□□□ 0.36
ACTN1-205ENST00000538545 FOXO4P98177 505 aa17.29■□□□□ 0.36
ACTN1-205ENST00000538545 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
ACTN1-205ENST00000538545 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.29■□□□□ 0.36
ACTN1-205ENST00000538545 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
ACTN1-205ENST00000538545 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 H7C1W4 665 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 ERC2O15083 957 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 TFCP2Q12800 502 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms