RNA–Protein interactions for RNA: ENST00000538408.1

AC027544.1-201, humanhuman

BASIC

Gene AC027544.1, Length 433 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027544.1-201ENST00000538408 HOXB7P09629 217 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 CEP85Q6P2H3 762 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 G2E3Q7L622 706 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 KRT28Q7Z3Y7 464 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 MIS18AQ9NYP9 233 aa11.24□□□□□ -0.61
AC027544.1-201ENST00000538408 NBR1Q14596 966 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 PXDNQ92626 1479 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 C5P01031 1676 aa11.23□□□□□ -0.61
AC027544.1-201ENST00000538408 LAMB4A4D0S4 1761 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 HSPA1LP34931 641 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 RBM25P49756 843 aaKnown RBP11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 FLIIQ13045 1269 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 PLEKHO1Q53GL0 409 aaPredicted RBP11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 MEIS3Q99687 375 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 C22orf23Q9BZE7 217 aa11.22□□□□□ -0.61
AC027544.1-201ENST00000538408 TMEM94Q12767 1356 aa11.21□□□□□ -0.61
AC027544.1-201ENST00000538408 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
AC027544.1-201ENST00000538408 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
AC027544.1-201ENST00000538408 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
AC027544.1-201ENST00000538408 MRC1P22897 1456 aa11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 HMMRO75330 724 aa11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
AC027544.1-201ENST00000538408 RNMTO43148 476 aaKnown RBP11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 GNAI3P08754 354 aa11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 FOXK1P85037 733 aa11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 LRRC59Q96AG4 307 aaKnown RBP11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
AC027544.1-201ENST00000538408 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 F6X3S4 739 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 CDC45O75419 566 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 GNAI2P04899 355 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 ATF3P18847 181 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 TTC22Q5TAA0 569 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
AC027544.1-201ENST00000538408 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 AFDNP55196 1824 aaKnown RBP11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 FKBP5Q13451 457 aaPredicted RBP11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 HDGFL1Q5TGJ6 251 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 SNX21Q969T3 373 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 OSBPL3Q9H4L5 887 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 ANTXR1Q9H6X2 564 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
AC027544.1-201ENST00000538408 CPDO75976 1380 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 PPP1R37O75864 691 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 TEFQ10587 303 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 GLI3P10071 1580 aa11.16□□□□□ -0.62
AC027544.1-201ENST00000538408 SALL3Q9BXA9 1300 aa11.15□□□□□ -0.62
AC027544.1-201ENST00000538408 A0A0G2JS52 829 aa11.15□□□□□ -0.62
AC027544.1-201ENST00000538408 DEKP35659 375 aaKnown RBP11.15□□□□□ -0.62
AC027544.1-201ENST00000538408 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
AC027544.1-201ENST00000538408 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 BTBD11A6QL63 1104 aa11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 SLC4A5Q9BY07 1137 aa11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 USP44Q9H0E7 712 aa11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 KDM6AO15550 1401 aaPredicted RBP11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 MEGF6O75095 1541 aa11.14□□□□□ -0.63
AC027544.1-201ENST00000538408 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 KIF2CQ99661 725 aa11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 ADCY9O60503 1353 aa11.13□□□□□ -0.63
AC027544.1-201ENST00000538408 AOX1Q06278 1338 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 GOLGA8CPA6NN73 597 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 KCNQ3O43525 872 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 LMOD2Q6P5Q4 547 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 SRCIN1Q9C0H9 1055 aa11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
AC027544.1-201ENST00000538408 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms