RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SEPT11Q9NVA2 429 aaKnown RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 ASXL1Q8IXJ9 1541 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 IFIT3O14879 490 aaKnown RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 CCDC83Q8IWF9 413 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 CCNL1Q9UK58 526 aaPredicted RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 NUP160Q12769 1436 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 TRIM5Q9C035 493 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 YTHDC2Q9H6S0 1430 aaKnown RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 TRIM27P14373 513 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 LIG1P18858 919 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 HAND2P61296 217 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 GSTO1P78417 241 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 CEP57L1Q8IYX8 460 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 ZSCAN31Q96LW9 406 aaPredicted RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 MAST1Q9Y2H9 1570 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 FLT4P35916 1363 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 PRAG1Q86YV5 1406 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 TSPY2A6NKD2 308 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 GJA3Q9Y6H8 435 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 LETM1O95202 739 aaPredicted RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 SERPINC1P01008 464 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 OGFOD1Q8N543 542 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 SMARCE1Q969G3 411 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 SPATA32Q96LK8 384 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 JAG2Q9Y219 1238 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 DISP1Q96F81 1524 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 SPDYE4A6NLX3 237 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 PPP4R3AQ6IN85 833 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 ZNF804AQ7Z570 1209 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 RAB11FIP4Q86YS3 637 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 LARP6Q9BRS8 491 aaKnown RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 TNMDQ9H2S6 317 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 TSPY26PQ9H489 355 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 CATIPQ7Z7H3 387 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 WDR33Q9C0J8 1336 aaKnown RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 GOLGA8AA7E2F4 631 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 GOLGA8BA8MQT2 603 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 KRT85P78386 507 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 SSRP1Q08945 709 aaKnown RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 RNF41Q9H4P4 317 aaPredicted RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 CFAP74Q9C0B2 1584 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 CYP7A1P22680 504 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 CCT2P78371 535 aaKnown RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 CRNKL1Q9BZJ0 848 aaKnown RBP6.28□□□□□ -1.4
LRP6-203ENST00000538239 KAT14Q9H8E8 782 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 POLKQ9UBT6 870 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 APBA3O96018 575 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 NLRP5P59047 1200 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 PDE4BQ07343 736 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 RALGAPBQ86X10 1494 aa6.28□□□□□ -1.4
LRP6-203ENST00000538239 JDP2Q8WYK2 163 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 EVI5LQ96CN4 794 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 EYA1Q99502 592 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 UBA5Q9GZZ9 404 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 SLAIN2Q9P270 581 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 DACH1Q9UI36 760 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 MAP3K5Q99683 1374 aa6.27□□□□□ -1.4
LRP6-203ENST00000538239 IP6K1Q92551 441 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 A0A1W2PP64 1363 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 RNMTO43148 476 aaKnown RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 RBM17Q96I25 401 aaKnown RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 NSFL1CQ9UNZ2 370 aaKnown RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 UQCRFS1P1P0C7P4 283 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 LMBR1LQ6UX01 489 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 SKAP1Q86WV1 359 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 DCAF5Q96JK2 942 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 PATL2C9JE40 543 aaKnown RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 SKIDA1Q1XH10 827 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 SPC24Q8NBT2 197 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 UPF3BQ9BZI7 483 aaKnown RBP6.27□□□□□ -1.41
LRP6-203ENST00000538239 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 MFSD6Q6ZSS7 791 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 C8orf58Q8NAV2 365 aa6.27□□□□□ -1.41
LRP6-203ENST00000538239 CCDC196A0A1B0GTZ2 297 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 TSPY3P0CV98 308 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 TSPY8P0CW00 308 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 ECHDC1Q9NTX5 307 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 SLC4A4Q9Y6R1 1079 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 TRAK2O60296 914 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 PPFIA3O75145 1194 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 PLS1Q14651 629 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 MNS1Q8NEH6 495 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 RUFY1Q96T51 708 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 GRM8O00222 908 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 NF2P35240 595 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 GPS2Q13227 327 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms