RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 PCDH11YQ9BZA8 1340 aa8.48□□□□□ -1.05
PTPRB-203ENST00000538174 RIPOR2Q9Y4F9 1068 aa8.48□□□□□ -1.05
PTPRB-203ENST00000538174 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
PTPRB-203ENST00000538174 CNTNAP4Q9C0A0 1308 aa8.48□□□□□ -1.05
PTPRB-203ENST00000538174 ADAMTS7Q9UKP4 1686 aa8.48□□□□□ -1.05
PTPRB-203ENST00000538174 PDE4AP27815 886 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 GZF1Q9H116 711 aaPredicted RBP8.47□□□□□ -1.05
PTPRB-203ENST00000538174 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 TERF2IPQ9NYB0 399 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 PLCD3Q8N3E9 789 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
PTPRB-203ENST00000538174 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
PTPRB-203ENST00000538174 ZCRB1Q8TBF4 217 aaKnown RBP8.46□□□□□ -1.06
PTPRB-203ENST00000538174 FOXD4L1Q9NU39 408 aa8.46□□□□□ -1.06
PTPRB-203ENST00000538174 CA12O43570 354 aa8.46□□□□□ -1.06
PTPRB-203ENST00000538174 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
PTPRB-203ENST00000538174 VEGFAP15692 232 aaPredicted RBP8.45□□□□□ -1.06
PTPRB-203ENST00000538174 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
PTPRB-203ENST00000538174 MEGF6O75095 1541 aa8.45□□□□□ -1.06
PTPRB-203ENST00000538174 MMP14P50281 582 aa8.45□□□□□ -1.06
PTPRB-203ENST00000538174 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRB-203ENST00000538174 CRBNQ96SW2 442 aa8.45□□□□□ -1.06
PTPRB-203ENST00000538174 ZBTB47Q9UFB7 747 aaPredicted RBP8.45□□□□□ -1.06
PTPRB-203ENST00000538174 RGL2O15211 777 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 CALD1Q05682 793 aaKnown RBP8.44□□□□□ -1.06
PTPRB-203ENST00000538174 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 GCC1Q96CN9 775 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 AK7Q96M32 723 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 PRDM4Q9UKN5 801 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 FER1L6Q2WGJ9 1857 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 GLTPD2A6NH11 291 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
PTPRB-203ENST00000538174 ALDH1L2Q3SY69 923 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
PTPRB-203ENST00000538174 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
PTPRB-203ENST00000538174 ZNF830Q96NB3 372 aaPredicted RBP8.43□□□□□ -1.06
PTPRB-203ENST00000538174 A0A1W2PP64 1363 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 APAF1O14727 1248 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 FCHSD2O94868 740 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 SPTY2D1Q68D10 685 aaPredicted RBP8.43□□□□□ -1.06
PTPRB-203ENST00000538174 PLEKHF1Q96S99 279 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
PTPRB-203ENST00000538174 ARHGAP45Q92619 1136 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 HDAC5Q9UQL6 1122 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 SMARCA5O60264 1052 aaPredicted RBP8.42□□□□□ -1.06
PTPRB-203ENST00000538174 MAP2K1Q02750 393 aaPredicted RBP8.42□□□□□ -1.06
PTPRB-203ENST00000538174 C9orf131Q5VYM1 1079 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 NOL8Q76FK4 1167 aaKnown RBP8.42□□□□□ -1.06
PTPRB-203ENST00000538174 HHIPL1Q96JK4 782 aa8.42□□□□□ -1.06
PTPRB-203ENST00000538174 PRIM1P49642 420 aaKnown RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 RARSP54136 660 aaKnown RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 ACSBG1Q96GR2 724 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 NMRK2Q9NPI5 230 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 NLRP2Q9NX02 1062 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 BCORQ6W2J9 1755 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 RASSF10A6NK89 507 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 RRP9O43818 475 aaKnown RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 CHADLQ6NUI6 762 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 HDGFL2Q7Z4V5 671 aaPredicted RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
PTPRB-203ENST00000538174 RGPD2P0DJD1 1756 aa8.41□□□□□ -1.06
PTPRB-203ENST00000538174 LMNB1P20700 586 aa8.4□□□□□ -1.06
PTPRB-203ENST00000538174 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
PTPRB-203ENST00000538174 TJP1Q07157 1748 aa8.4□□□□□ -1.06
PTPRB-203ENST00000538174 LTBP1Q14766 1721 aa8.4□□□□□ -1.06
PTPRB-203ENST00000538174 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.07
PTPRB-203ENST00000538174 ABHD8Q96I13 439 aa8.4□□□□□ -1.07
PTPRB-203ENST00000538174 KIF16BQ96L93 1317 aa8.4□□□□□ -1.07
PTPRB-203ENST00000538174 SLC12A5Q9H2X9 1139 aa8.39□□□□□ -1.07
PTPRB-203ENST00000538174 KCNA3P22001 575 aa8.39□□□□□ -1.07
PTPRB-203ENST00000538174 MTHFSP49914 203 aa8.39□□□□□ -1.07
PTPRB-203ENST00000538174 TRAIPQ9BWF2 469 aa8.39□□□□□ -1.07
PTPRB-203ENST00000538174 SOS1Q07889 1333 aaPredicted RBP8.38□□□□□ -1.07
PTPRB-203ENST00000538174 MYCNP04198 464 aaPredicted RBP8.38□□□□□ -1.07
PTPRB-203ENST00000538174 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
PTPRB-203ENST00000538174 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
PTPRB-203ENST00000538174 LMOD3Q0VAK6 560 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 LDHDQ86WU2 507 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
PTPRB-203ENST00000538174 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
PTPRB-203ENST00000538174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
PTPRB-203ENST00000538174 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
PTPRB-203ENST00000538174 FYB1O15117 783 aa8.37□□□□□ -1.07
PTPRB-203ENST00000538174 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
PTPRB-203ENST00000538174 AXDND1Q5T1B0 1012 aaPredicted RBP8.37□□□□□ -1.07
PTPRB-203ENST00000538174 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
PTPRB-203ENST00000538174 PARP3Q9Y6F1 533 aa8.37□□□□□ -1.07
PTPRB-203ENST00000538174 MRC1P22897 1456 aa8.37□□□□□ -1.07
PTPRB-203ENST00000538174 HSP90AB1P08238 724 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms