RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
DDB1-210ENST00000538129 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
DDB1-210ENST00000538129 SHPRHQ149N8 1683 aa8.24□□□□□ -1.09
DDB1-210ENST00000538129 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
DDB1-210ENST00000538129 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
DDB1-210ENST00000538129 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
DDB1-210ENST00000538129 SLC12A5Q9H2X9 1139 aa8.23□□□□□ -1.09
DDB1-210ENST00000538129 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
DDB1-210ENST00000538129 TERF2IPQ9NYB0 399 aa8.23□□□□□ -1.09
DDB1-210ENST00000538129 ARHGEF10O15013 1369 aa8.22□□□□□ -1.09
DDB1-210ENST00000538129 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
DDB1-210ENST00000538129 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
DDB1-210ENST00000538129 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
DDB1-210ENST00000538129 AP1G2O75843 785 aa8.22□□□□□ -1.09
DDB1-210ENST00000538129 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
DDB1-210ENST00000538129 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.09
DDB1-210ENST00000538129 TNS3Q68CZ2 1445 aa8.21□□□□□ -1.09
DDB1-210ENST00000538129 RFC5P40937 340 aa8.21□□□□□ -1.1
DDB1-210ENST00000538129 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
DDB1-210ENST00000538129 ABTB2Q8N961 1025 aa8.21□□□□□ -1.1
DDB1-210ENST00000538129 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
DDB1-210ENST00000538129 KTN1Q86UP2 1357 aaKnown RBP8.21□□□□□ -1.1
DDB1-210ENST00000538129 TRPM3Q9HCF6 1732 aaPredicted RBP8.2□□□□□ -1.1
DDB1-210ENST00000538129 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
DDB1-210ENST00000538129 NLRP13Q86W25 1043 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 COL22A1Q8NFW1 1626 aaPredicted RBP8.2□□□□□ -1.1
DDB1-210ENST00000538129 TTC21BQ7Z4L5 1316 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 USP6P35125 1406 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
DDB1-210ENST00000538129 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
DDB1-210ENST00000538129 LAPTM4AQ15012 233 aa8.19□□□□□ -1.1
DDB1-210ENST00000538129 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
DDB1-210ENST00000538129 TTC21AQ8NDW8 1320 aa8.19□□□□□ -1.1
DDB1-210ENST00000538129 AKAP12Q02952 1782 aa8.19□□□□□ -1.1
DDB1-210ENST00000538129 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
DDB1-210ENST00000538129 ALS2Q96Q42 1657 aa8.18□□□□□ -1.1
DDB1-210ENST00000538129 ADAMTS2O95450 1211 aa8.18□□□□□ -1.1
DDB1-210ENST00000538129 ZNF697Q5TEC3 545 aa8.18□□□□□ -1.1
DDB1-210ENST00000538129 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
DDB1-210ENST00000538129 MED1Q15648 1581 aaPredicted RBP8.18□□□□□ -1.1
DDB1-210ENST00000538129 WNT7BP56706 349 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 CTDSPL2Q05D32 466 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 TRIM32Q13049 653 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 NUTM2GQ5VZR2 741 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 ZNF772Q68DY9 489 aaPredicted RBP8.17□□□□□ -1.1
DDB1-210ENST00000538129 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 FNBP4Q8N3X1 1017 aaPredicted RBP8.17□□□□□ -1.1
DDB1-210ENST00000538129 UNC93B1Q9H1C4 597 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 A0A1W2PP64 1363 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 ANKRD36BQ8N2N9 1353 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 LRP6O75581 1613 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 MON2Q7Z3U7 1717 aa8.17□□□□□ -1.1
DDB1-210ENST00000538129 GCP02774 474 aa8.16□□□□□ -1.1
DDB1-210ENST00000538129 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
DDB1-210ENST00000538129 USP31Q70CQ4 1352 aa8.16□□□□□ -1.1
DDB1-210ENST00000538129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-210ENST00000538129 KCNH5Q8NCM2 988 aa8.16□□□□□ -1.1
DDB1-210ENST00000538129 GPKOWQ92917 476 aaPredicted RBP eCLIP8.16□□□□□ -1.1
DDB1-210ENST00000538129 POLR3GLQ9BT43 218 aa8.16□□□□□ -1.1
DDB1-210ENST00000538129 USP19O94966 1318 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 FAM83GA6ND36 823 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 C8orf37Q96NL8 207 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 PANK3Q9H999 370 aa8.15□□□□□ -1.1
DDB1-210ENST00000538129 RGS17Q9UGC6 210 aaPredicted RBP8.15□□□□□ -1.1
DDB1-210ENST00000538129 MARF1Q9Y4F3 1742 aaKnown RBP8.15□□□□□ -1.11
DDB1-210ENST00000538129 AFF2P51816 1311 aa8.14□□□□□ -1.11
DDB1-210ENST00000538129 FYB1O15117 783 aa8.14□□□□□ -1.11
DDB1-210ENST00000538129 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
DDB1-210ENST00000538129 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
DDB1-210ENST00000538129 NME9Q86XW9 330 aa8.14□□□□□ -1.11
DDB1-210ENST00000538129 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
DDB1-210ENST00000538129 CCDC7Q96M83 1385 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 WASHC2AQ641Q2 1341 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 ZC3H4Q9UPT8 1303 aaKnown RBP8.13□□□□□ -1.11
DDB1-210ENST00000538129 PER1O15534 1290 aaPredicted RBP8.13□□□□□ -1.11
DDB1-210ENST00000538129 ZC3H6P61129 1189 aaKnown RBP8.13□□□□□ -1.11
DDB1-210ENST00000538129 AGERQ15109 404 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 COG3Q96JB2 828 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 USP21Q9UK80 565 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 PIK3C2AO00443 1686 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 NRKQ7Z2Y5 1582 aa8.13□□□□□ -1.11
DDB1-210ENST00000538129 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 CRYBG1Q9Y4K1 1723 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 CPDO75976 1380 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 MYOM1P52179 1685 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 CGNL1Q0VF96 1302 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
DDB1-210ENST00000538129 UNC5CLQ8IV45 518 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
DDB1-210ENST00000538129 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 MAP10Q9P2G4 905 aa8.12□□□□□ -1.11
DDB1-210ENST00000538129 TRPC5Q9UL62 973 aaPredicted RBP8.12□□□□□ -1.11
DDB1-210ENST00000538129 PDZRN3Q9UPQ7 1066 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms