RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SLF2Q8IX21 1173 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 ACEP12821 1306 aa13.02□□□□□ -0.32
LINC00346-201ENST00000538077 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 KAT14Q9H8E8 782 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 MACROD2A1Z1Q3 448 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 ANAPC15P60006 121 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 CACNA2D4Q7Z3S7 1137 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 ABCC5O15440 1437 aa13.02□□□□□ -0.33
LINC00346-201ENST00000538077 LEKR1Q6ZMV7 388 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 JAG2Q9Y219 1238 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 USP8P40818 1118 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC150Q8NCX0 1101 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
LINC00346-201ENST00000538077 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
LINC00346-201ENST00000538077 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
LINC00346-201ENST00000538077 MYO1BO43795 1136 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 FLIIQ13045 1269 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 RIMBP2O15034 1052 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 PLS1Q14651 629 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 MAP3K11Q16584 847 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
LINC00346-201ENST00000538077 CABP5Q9NP86 173 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 RARSP54136 660 aaKnown RBP13□□□□□ -0.33
LINC00346-201ENST00000538077 FERMT2Q96AC1 680 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 FKBP15Q5T1M5 1219 aa13□□□□□ -0.33
LINC00346-201ENST00000538077 BIN1O00499 593 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC112Q8NEF3 446 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 BACH2Q9BYV9 841 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 MICU3Q86XE3 530 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 BICD1Q96G01 975 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 WDR62O43379 1518 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
LINC00346-201ENST00000538077 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 MSH6P52701 1360 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 HLA-DOAP06340 250 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
LINC00346-201ENST00000538077 SPA17Q15506 151 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
LINC00346-201ENST00000538077 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
LINC00346-201ENST00000538077 CWC15Q9P013 229 aaKnown RBP12.99□□□□□ -0.33
LINC00346-201ENST00000538077 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 PKNOX2Q96KN3 472 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
LINC00346-201ENST00000538077 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
LINC00346-201ENST00000538077 C16orf71Q8IYS4 520 aaPredicted RBP12.98□□□□□ -0.33
LINC00346-201ENST00000538077 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
LINC00346-201ENST00000538077 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 GJB2P29033 226 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 ZCRB1Q8TBF4 217 aaKnown RBP12.97□□□□□ -0.33
LINC00346-201ENST00000538077 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 FANCAO15360 1455 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 BAG3O95817 575 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 CASQ1P31415 396 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
LINC00346-201ENST00000538077 PDE4BQ07343 736 aa12.97□□□□□ -0.33
LINC00346-201ENST00000538077 TDRD12Q587J7 1177 aaKnown RBP12.97□□□□□ -0.33
LINC00346-201ENST00000538077 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
LINC00346-201ENST00000538077 UQCRHLA0A096LP55 91 aa12.96□□□□□ -0.33
LINC00346-201ENST00000538077 UQCRHP07919 91 aa12.96□□□□□ -0.33
LINC00346-201ENST00000538077 DNAI2Q9GZS0 605 aa12.96□□□□□ -0.33
LINC00346-201ENST00000538077 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.33
LINC00346-201ENST00000538077 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
LINC00346-201ENST00000538077 TTF1Q15361 905 aaPredicted RBP12.96□□□□□ -0.33
LINC00346-201ENST00000538077 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00346-201ENST00000538077 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
LINC00346-201ENST00000538077 IQCEQ6IPM2 695 aa12.96□□□□□ -0.34
LINC00346-201ENST00000538077 EVI5LQ96CN4 794 aa12.96□□□□□ -0.34
LINC00346-201ENST00000538077 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.34
LINC00346-201ENST00000538077 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.34
LINC00346-201ENST00000538077 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.34
LINC00346-201ENST00000538077 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.34
LINC00346-201ENST00000538077 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms