RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 NFKBIEO00221 500 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 C21orf2O43822 256 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
CHD4-207ENST00000537634 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
CHD4-207ENST00000537634 RRAGCQ9HB90 399 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
CHD4-207ENST00000537634 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
CHD4-207ENST00000537634 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 PRELPP51888 382 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 FSTL1Q12841 308 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
CHD4-207ENST00000537634 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
CHD4-207ENST00000537634 DICER1Q9UPY3 1922 aaKnown RBP12.8□□□□□ -0.36
CHD4-207ENST00000537634 GLTPD2A6NH11 291 aa12.8□□□□□ -0.36
CHD4-207ENST00000537634 RGL2O15211 777 aa12.8□□□□□ -0.36
CHD4-207ENST00000537634 SRGNP10124 158 aa12.8□□□□□ -0.36
CHD4-207ENST00000537634 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
CHD4-207ENST00000537634 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
CHD4-207ENST00000537634 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
CHD4-207ENST00000537634 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD4-207ENST00000537634 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
CHD4-207ENST00000537634 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
CHD4-207ENST00000537634 TAOK3Q9H2K8 898 aa12.79□□□□□ -0.36
CHD4-207ENST00000537634 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
CHD4-207ENST00000537634 CEP350Q5VT06 3117 aa12.78□□□□□ -0.36
CHD4-207ENST00000537634 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
CHD4-207ENST00000537634 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
CHD4-207ENST00000537634 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
CHD4-207ENST00000537634 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
CHD4-207ENST00000537634 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
CHD4-207ENST00000537634 FAM177BA6PVY3 158 aa12.77□□□□□ -0.37
CHD4-207ENST00000537634 NPR1P16066 1061 aa12.77□□□□□ -0.37
CHD4-207ENST00000537634 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
CHD4-207ENST00000537634 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
CHD4-207ENST00000537634 RALBP1Q15311 655 aa12.77□□□□□ -0.37
CHD4-207ENST00000537634 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
CHD4-207ENST00000537634 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
CHD4-207ENST00000537634 NUP98P52948 1817 aa12.76□□□□□ -0.37
CHD4-207ENST00000537634 HLFQ16534 295 aa12.76□□□□□ -0.37
CHD4-207ENST00000537634 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
CHD4-207ENST00000537634 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 MYL6BP14649 208 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 CCDC93Q567U6 631 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 DNAJC5GQ8N7S2 189 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
CHD4-207ENST00000537634 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
CHD4-207ENST00000537634 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
CHD4-207ENST00000537634 RIPK4P57078 832 aa12.74□□□□□ -0.37
CHD4-207ENST00000537634 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
CHD4-207ENST00000537634 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
CHD4-207ENST00000537634 HTRA3P83110 453 aa12.73□□□□□ -0.37
CHD4-207ENST00000537634 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
CHD4-207ENST00000537634 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
CHD4-207ENST00000537634 ABCC12Q96J65 1359 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 IBTKQ9P2D0 1353 aaPredicted RBP12.72□□□□□ -0.37
CHD4-207ENST00000537634 GPTP24298 496 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 FKBP4Q02790 459 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD4-207ENST00000537634 DDX10Q13206 875 aaKnown RBP12.72□□□□□ -0.37
CHD4-207ENST00000537634 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
CHD4-207ENST00000537634 POTECB2RU33 542 aa12.71□□□□□ -0.37
CHD4-207ENST00000537634 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
CHD4-207ENST00000537634 IFFO2Q5TF58 517 aa12.71□□□□□ -0.37
CHD4-207ENST00000537634 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
CHD4-207ENST00000537634 BABAM1Q9NWV8 329 aa12.71□□□□□ -0.37
CHD4-207ENST00000537634 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
CHD4-207ENST00000537634 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
CHD4-207ENST00000537634 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
CHD4-207ENST00000537634 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
CHD4-207ENST00000537634 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
CHD4-207ENST00000537634 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
CHD4-207ENST00000537634 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
CHD4-207ENST00000537634 ZNF277Q9NRM2 450 aaPredicted RBP12.7□□□□□ -0.38
CHD4-207ENST00000537634 SCN4AP35499 1836 aa12.69□□□□□ -0.38
CHD4-207ENST00000537634 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
CHD4-207ENST00000537634 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHD4-207ENST00000537634 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
CHD4-207ENST00000537634 CCDC146Q8IYE0 955 aa12.69□□□□□ -0.38
CHD4-207ENST00000537634 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
CHD4-207ENST00000537634 IARSP41252 1262 aaKnown RBP12.68□□□□□ -0.38
CHD4-207ENST00000537634 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 PARP10Q53GL7 1025 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 SUSD4Q5VX71 490 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
CHD4-207ENST00000537634 NTSR2O95665 410 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 PDIA6Q15084 440 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
CHD4-207ENST00000537634 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms