RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 FMN2Q9NZ56 1722 aa18.62■□□□□ 0.57
CHFR-213ENST00000536843 ESYT1Q9BSJ8 1104 aa18.62■□□□□ 0.57
CHFR-213ENST00000536843 PALD1Q9ULE6 856 aa18.62■□□□□ 0.57
CHFR-213ENST00000536843 PTGS1P23219 599 aa18.61■□□□□ 0.57
CHFR-213ENST00000536843 HOXC9P31274 260 aa18.61■□□□□ 0.57
CHFR-213ENST00000536843 G2E3Q7L622 706 aa18.61■□□□□ 0.57
CHFR-213ENST00000536843 CCDC112Q8NEF3 446 aa18.61■□□□□ 0.57
CHFR-213ENST00000536843 TCHHQ07283 1943 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 GIMAP6Q6P9H5 292 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 MSH6P52701 1360 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 ZSCAN22P10073 491 aaPredicted RBP18.6■□□□□ 0.57
CHFR-213ENST00000536843 TNNT1P13805 278 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 ZNF397Q8NF99 534 aaPredicted RBP18.6■□□□□ 0.57
CHFR-213ENST00000536843 MEIS3Q99687 375 aa18.6■□□□□ 0.57
CHFR-213ENST00000536843 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
CHFR-213ENST00000536843 C16orf45Q96MC5 204 aaPredicted RBP18.59■□□□□ 0.57
CHFR-213ENST00000536843 PDE1AP54750 535 aa18.59■□□□□ 0.57
CHFR-213ENST00000536843 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
CHFR-213ENST00000536843 NOL8Q76FK4 1167 aaKnown RBP18.59■□□□□ 0.57
CHFR-213ENST00000536843 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.57
CHFR-213ENST00000536843 CCDC192P0DO97 292 aa18.58■□□□□ 0.56
CHFR-213ENST00000536843 NAA30Q147X3 362 aaPredicted RBP18.58■□□□□ 0.56
CHFR-213ENST00000536843 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
CHFR-213ENST00000536843 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
CHFR-213ENST00000536843 ATP6V1DQ9Y5K8 247 aa18.57■□□□□ 0.56
CHFR-213ENST00000536843 F6X3S4 739 aa18.57■□□□□ 0.56
CHFR-213ENST00000536843 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
CHFR-213ENST00000536843 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
CHFR-213ENST00000536843 TSPYL1Q9H0U9 437 aa18.56■□□□□ 0.56
CHFR-213ENST00000536843 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
CHFR-213ENST00000536843 KMT5BQ4FZB7 885 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 SLC4A10Q6U841 1118 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 CCDC186Q7Z3E2 898 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
CHFR-213ENST00000536843 CAPN2P17655 700 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
CHFR-213ENST00000536843 APBB1O00213 710 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 F13A1P00488 732 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.54■□□□□ 0.56
CHFR-213ENST00000536843 STX6O43752 255 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 ZSCAN25Q6NSZ9 544 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
CHFR-213ENST00000536843 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
CHFR-213ENST00000536843 NWD1Q149M9 1564 aa18.54■□□□□ 0.56
CHFR-213ENST00000536843 FIBPO43427 364 aa18.53■□□□□ 0.56
CHFR-213ENST00000536843 LRMPQ12912 555 aa18.53■□□□□ 0.56
CHFR-213ENST00000536843 PLCD3Q8N3E9 789 aa18.53■□□□□ 0.56
CHFR-213ENST00000536843 ANO2Q9NQ90 1003 aa18.53■□□□□ 0.56
CHFR-213ENST00000536843 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
CHFR-213ENST00000536843 SYT1P21579 422 aa18.52■□□□□ 0.56
CHFR-213ENST00000536843 CHMLP26374 656 aa18.52■□□□□ 0.56
CHFR-213ENST00000536843 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
CHFR-213ENST00000536843 CCT4P50991 539 aaKnown RBP18.52■□□□□ 0.55
CHFR-213ENST00000536843 STK31Q9BXU1 1019 aa18.52■□□□□ 0.55
CHFR-213ENST00000536843 HMMRO75330 724 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 CEP135Q66GS9 1140 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 PLA2G4DQ86XP0 818 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 KIF1BPQ96EK5 621 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
CHFR-213ENST00000536843 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
CHFR-213ENST00000536843 TPD52L1Q16890 204 aaPredicted RBP18.5■□□□□ 0.55
CHFR-213ENST00000536843 MRVI1Q9Y6F6 885 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 ERICH4A6NGS2 130 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 CYP2C19P33261 490 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 ZNF75DP51815 510 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 HSPA2P54652 639 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
CHFR-213ENST00000536843 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 FLIIQ13045 1269 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
CHFR-213ENST00000536843 FBXO38Q6PIJ6 1188 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 HSPA4P34932 840 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 TPRNQ4KMQ1 711 aa18.49■□□□□ 0.55
CHFR-213ENST00000536843 ZNF215Q9UL58 517 aaPredicted RBP18.49■□□□□ 0.55
CHFR-213ENST00000536843 TYRO3Q06418 890 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 IP6K1Q92551 441 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 NRBP1Q9UHY1 535 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 USP54Q70EL1 1684 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 LRRC37A3O60309 1634 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 LUZP1Q86V48 1076 aa18.48■□□□□ 0.55
CHFR-213ENST00000536843 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 PSME1Q06323 249 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 DRC7Q8IY82 874 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 TTC14Q96N46 770 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 GNAI2P04899 355 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 RNF20Q5VTR2 975 aa18.47■□□□□ 0.55
CHFR-213ENST00000536843 CACTINQ8WUQ7 758 aaKnown RBP18.47■□□□□ 0.55
CHFR-213ENST00000536843 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
CHFR-213ENST00000536843 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
CHFR-213ENST00000536843 NYAP1Q6ZVC0 841 aa18.46■□□□□ 0.55
CHFR-213ENST00000536843 TDRD7Q8NHU6 1098 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms