RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PCNTO95613 3336 aa26.13■■□□□ 1.77
TNFRSF1B-204ENST00000536782 NFKBIEO00221 500 aa26.12■■□□□ 1.77
TNFRSF1B-204ENST00000536782 FSTL1Q12841 308 aa26.12■■□□□ 1.77
TNFRSF1B-204ENST00000536782 ZNF652Q9Y2D9 606 aa26.12■■□□□ 1.77
TNFRSF1B-204ENST00000536782 SLX4Q8IY92 1834 aa26.11■■□□□ 1.77
TNFRSF1B-204ENST00000536782 GLTPD2A6NH11 291 aa26.1■■□□□ 1.77
TNFRSF1B-204ENST00000536782 C21orf2O43822 256 aa26.1■■□□□ 1.77
TNFRSF1B-204ENST00000536782 HTRA3P83110 453 aa26.1■■□□□ 1.77
TNFRSF1B-204ENST00000536782 ZNF219Q9P2Y4 722 aaPredicted RBP26.1■■□□□ 1.77
TNFRSF1B-204ENST00000536782 ARFGEF2Q9Y6D5 1785 aa26.1■■□□□ 1.77
TNFRSF1B-204ENST00000536782 NBPF26B4DH59 902 aa26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 NBPF10Q6P3W6 841 aaKnown RBP26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 NBPF5PQ86XG9 351 aaPredicted RBP26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 NBPF15Q8N660 670 aa26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 CNKSR1Q969H4 720 aa26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 MIS18AQ9NYP9 233 aa26.09■■□□□ 1.77
TNFRSF1B-204ENST00000536782 STYK1Q6J9G0 422 aa26.08■■□□□ 1.77
TNFRSF1B-204ENST00000536782 PNISRQ8TF01 805 aaKnown RBP26.08■■□□□ 1.77
TNFRSF1B-204ENST00000536782 RGL2O15211 777 aa26.07■■□□□ 1.76
TNFRSF1B-204ENST00000536782 SRGNP10124 158 aa26.07■■□□□ 1.76
TNFRSF1B-204ENST00000536782 MASTLQ96GX5 879 aa26.07■■□□□ 1.76
TNFRSF1B-204ENST00000536782 PLEKHF1Q96S99 279 aa26.07■■□□□ 1.76
TNFRSF1B-204ENST00000536782 DLG5Q8TDM6 1919 aa26.07■■□□□ 1.76
TNFRSF1B-204ENST00000536782 VEGFAP15692 232 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF1B-204ENST00000536782 SMC1BQ8NDV3 1235 aa26.05■■□□□ 1.76
TNFRSF1B-204ENST00000536782 PNNQ9H307 717 aaKnown RBP26.05■■□□□ 1.76
TNFRSF1B-204ENST00000536782 NIP7Q9Y221 180 aaKnown RBP eCLIP26.05■■□□□ 1.76
TNFRSF1B-204ENST00000536782 NFE2L2Q16236 605 aa26.04■■□□□ 1.76
TNFRSF1B-204ENST00000536782 DPY19L2Q6NUT2 758 aa26.04■■□□□ 1.76
TNFRSF1B-204ENST00000536782 PRPF40BQ6NWY9 871 aaKnown RBP26.04■■□□□ 1.76
TNFRSF1B-204ENST00000536782 TPTE2Q6XPS3 522 aa26.04■■□□□ 1.76
TNFRSF1B-204ENST00000536782 SOGA3Q5TF21 947 aa26.03■■□□□ 1.76
TNFRSF1B-204ENST00000536782 TAOK3Q9H2K8 898 aa26.03■■□□□ 1.76
TNFRSF1B-204ENST00000536782 LTBP3Q9NS15 1303 aa26.03■■□□□ 1.76
TNFRSF1B-204ENST00000536782 ERFEQ4G0M1 354 aa26.02■■□□□ 1.76
TNFRSF1B-204ENST00000536782 MAPK8IP3Q9UPT6 1336 aa26.02■■□□□ 1.76
TNFRSF1B-204ENST00000536782 POTECB2RU33 542 aa26.01■■□□□ 1.75
TNFRSF1B-204ENST00000536782 EIF4A1P60842 406 aaKnown RBP26■■□□□ 1.75
TNFRSF1B-204ENST00000536782 KLRG1Q96E93 195 aa26■■□□□ 1.75
TNFRSF1B-204ENST00000536782 KLRG2A4D1S0 409 aaPredicted RBP25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 FAM177BA6PVY3 158 aa25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 NPR1P16066 1061 aa25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 HLFQ16534 295 aa25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 THUMPD2Q9BTF0 503 aaKnown RBP25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 LAMB4A4D0S4 1761 aa25.99■■□□□ 1.75
TNFRSF1B-204ENST00000536782 KDM3BQ7LBC6 1761 aa25.98■■□□□ 1.75
TNFRSF1B-204ENST00000536782 NGEFQ8N5V2 710 aa25.98■■□□□ 1.75
TNFRSF1B-204ENST00000536782 JMYQ8N9B5 988 aa25.98■■□□□ 1.75
TNFRSF1B-204ENST00000536782 GTF2E1P29083 439 aaPredicted RBP25.97■■□□□ 1.75
TNFRSF1B-204ENST00000536782 ERVV-1B6SEH8 477 aa25.96■■□□□ 1.75
TNFRSF1B-204ENST00000536782 C7orf43Q8WVR3 580 aa25.96■■□□□ 1.75
TNFRSF1B-204ENST00000536782 RRP7AQ9Y3A4 280 aaKnown RBP25.96■■□□□ 1.75
TNFRSF1B-204ENST00000536782 RALBP1Q15311 655 aa25.95■■□□□ 1.74
TNFRSF1B-204ENST00000536782 CCDC93Q567U6 631 aa25.95■■□□□ 1.74
TNFRSF1B-204ENST00000536782 NUP98P52948 1817 aa25.94■■□□□ 1.74
TNFRSF1B-204ENST00000536782 KIF6Q6ZMV9 814 aa25.94■■□□□ 1.74
TNFRSF1B-204ENST00000536782 MAP3K15Q6ZN16 1313 aa25.93■■□□□ 1.74
TNFRSF1B-204ENST00000536782 NYXQ9GZU5 481 aa25.93■■□□□ 1.74
TNFRSF1B-204ENST00000536782 MYL6BP14649 208 aa25.92■■□□□ 1.74
TNFRSF1B-204ENST00000536782 ALDH1B1P30837 517 aa25.92■■□□□ 1.74
TNFRSF1B-204ENST00000536782 TTLL7Q6ZT98 887 aa25.91■■□□□ 1.74
TNFRSF1B-204ENST00000536782 TSPYL4Q9UJ04 414 aa25.91■■□□□ 1.74
TNFRSF1B-204ENST00000536782 DDNO94850 711 aaPredicted RBP25.9■■□□□ 1.74
TNFRSF1B-204ENST00000536782 RIPK4P57078 832 aa25.9■■□□□ 1.74
TNFRSF1B-204ENST00000536782 FKBP4Q02790 459 aaKnown RBP eCLIP25.89■■□□□ 1.74
TNFRSF1B-204ENST00000536782 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
TNFRSF1B-204ENST00000536782 ZBTB3Q9H5J0 574 aa25.89■■□□□ 1.74
TNFRSF1B-204ENST00000536782 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
TNFRSF1B-204ENST00000536782 NUTM1Q86Y26 1132 aa25.88■■□□□ 1.73
TNFRSF1B-204ENST00000536782 OLFM4Q6UX06 510 aa25.87■■□□□ 1.73
TNFRSF1B-204ENST00000536782 ABCC12Q96J65 1359 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 GPTP24298 496 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 LMOD3Q0VAK6 560 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 CRY2Q49AN0 593 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 ZNF277Q9NRM2 450 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 BABAM1Q9NWV8 329 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 SCN4AP35499 1836 aa25.86■■□□□ 1.73
TNFRSF1B-204ENST00000536782 IBTKQ9P2D0 1353 aaPredicted RBP25.85■■□□□ 1.73
TNFRSF1B-204ENST00000536782 TMPOP42166 694 aaKnown RBP25.85■■□□□ 1.73
TNFRSF1B-204ENST00000536782 UBN2Q6ZU65 1347 aa25.85■■□□□ 1.73
TNFRSF1B-204ENST00000536782 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
TNFRSF1B-204ENST00000536782 GIGYF2Q6Y7W6 1299 aaKnown RBP25.84■■□□□ 1.73
TNFRSF1B-204ENST00000536782 ZNF34Q8IZ26 560 aa25.84■■□□□ 1.73
TNFRSF1B-204ENST00000536782 IQCA1LA6NCM1 817 aa25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 POTEIP0CG38 1075 aa25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 POTEJP0CG39 1038 aa25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 EIF2S2P20042 333 aaKnown RBP25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 SUSD4Q5VX71 490 aa25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 CHADLQ6NUI6 762 aa25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 RPGRQ92834 1020 aaKnown RBP25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 MYBBP1AQ9BQG0 1328 aaKnown RBP25.83■■□□□ 1.73
TNFRSF1B-204ENST00000536782 RIC1Q4ADV7 1423 aa25.82■■□□□ 1.72
TNFRSF1B-204ENST00000536782 COL13A1Q5TAT6 717 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF1B-204ENST00000536782 L3MBTL3Q96JM7 780 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF1B-204ENST00000536782 PDIA6Q15084 440 aa25.81■■□□□ 1.72
TNFRSF1B-204ENST00000536782 SYNE4Q8N205 404 aa25.81■■□□□ 1.72
TNFRSF1B-204ENST00000536782 SNED1Q8TER0 1413 aa25.8■■□□□ 1.72
TNFRSF1B-204ENST00000536782 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF1B-204ENST00000536782 IARSP41252 1262 aaKnown RBP25.8■■□□□ 1.72
TNFRSF1B-204ENST00000536782 CC2D2BQ6DHV5 1058 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms