RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ZPR1O75312 459 aa14.53□□□□□ -0.08
CHRNB1-202ENST00000536404 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
CHRNB1-202ENST00000536404 SKAP1Q86WV1 359 aa14.53□□□□□ -0.08
CHRNB1-202ENST00000536404 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
CHRNB1-202ENST00000536404 ADCY9O60503 1353 aa14.53□□□□□ -0.08
CHRNB1-202ENST00000536404 POLRMTO00411 1230 aaKnown RBP14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 FGD1P98174 961 aa14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 TEFQ10587 303 aa14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 CCDC27Q2M243 656 aa14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 TTC5Q8N0Z6 440 aa14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 RUNDC1Q96C34 613 aa14.52□□□□□ -0.08
CHRNB1-202ENST00000536404 BCAR3O75815 825 aa14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 FCHSD2O94868 740 aa14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 WWC1Q8IX03 1113 aa14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 RWDD1Q9H446 243 aaPredicted RBP14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
CHRNB1-202ENST00000536404 KCNQ3O43525 872 aa14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 ARHGAP27Q6ZUM4 889 aa14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 GPBP1L1Q9HC44 474 aaPredicted RBP14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 COL15A1P39059 1388 aa14.51□□□□□ -0.09
CHRNB1-202ENST00000536404 UBR2Q8IWV8 1755 aa14.5□□□□□ -0.09
CHRNB1-202ENST00000536404 CHRNA5P30532 468 aa14.5□□□□□ -0.09
CHRNB1-202ENST00000536404 PDE4CQ08493 712 aa14.5□□□□□ -0.09
CHRNB1-202ENST00000536404 NFIXQ14938 502 aa14.5□□□□□ -0.09
CHRNB1-202ENST00000536404 STARD3NLO95772 234 aa14.49□□□□□ -0.09
CHRNB1-202ENST00000536404 IGHDP01880 384 aa14.49□□□□□ -0.09
CHRNB1-202ENST00000536404 MYH16Q9H6N6 1097 aa14.49□□□□□ -0.09
CHRNB1-202ENST00000536404 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
CHRNB1-202ENST00000536404 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 CALD1Q05682 793 aaKnown RBP14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 PIM2Q9P1W9 311 aa14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 SIPA1L3O60292 1781 aaPredicted RBP14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 CEMIPQ8WUJ3 1361 aa14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
CHRNB1-202ENST00000536404 BRCA1P38398 1863 aaKnown RBP14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 BTBD11A6QL63 1104 aa14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 SERPINB2P05120 415 aa14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 DALRD3Q5D0E6 543 aaKnown RBP14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 MCM10Q7L590 875 aa14.47□□□□□ -0.09
CHRNB1-202ENST00000536404 A1BGP04217 495 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 DCTN1Q14203 1278 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 BICDL1Q6ZP65 573 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 FMNL2Q96PY5 1086 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 TEX13AQ9BXU3 409 aaPredicted RBP14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 TBC1D2BQ9UPU7 963 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 COG6Q9Y2V7 657 aa14.46□□□□□ -0.09
CHRNB1-202ENST00000536404 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
CHRNB1-202ENST00000536404 A0A087WZG4 1122 aa14.45□□□□□ -0.1
CHRNB1-202ENST00000536404 TBC1D32Q96NH3 1257 aa14.45□□□□□ -0.1
CHRNB1-202ENST00000536404 ZNF330Q9Y3S2 320 aaPredicted RBP14.45□□□□□ -0.1
CHRNB1-202ENST00000536404 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 KIF3CO14782 793 aa14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 TBC1D9BQ66K14 1250 aa14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 RTF1Q92541 710 aaKnown RBP14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 NAP1L5Q96NT1 182 aaPredicted RBP14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
CHRNB1-202ENST00000536404 IL6STP40189 918 aaPredicted RBP14.43□□□□□ -0.1
CHRNB1-202ENST00000536404 PIP4K2AP48426 406 aaPredicted RBP14.43□□□□□ -0.1
CHRNB1-202ENST00000536404 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
CHRNB1-202ENST00000536404 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
CHRNB1-202ENST00000536404 CEP350Q5VT06 3117 aa14.42□□□□□ -0.1
CHRNB1-202ENST00000536404 CLCN1P35523 988 aa14.42□□□□□ -0.1
CHRNB1-202ENST00000536404 CARMIL3Q8ND23 1372 aa14.42□□□□□ -0.1
CHRNB1-202ENST00000536404 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
CHRNB1-202ENST00000536404 C2CD5Q86YS7 1000 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 CCDC24Q8N4L8 307 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 HTATSF1O43719 755 aaKnown RBP14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 CAMTA2O94983 1202 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 TPM2P07951 284 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 ZKSCAN2Q63HK3 967 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 PDCL3Q9H2J4 239 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
CHRNB1-202ENST00000536404 SNRPA1P09661 255 aaKnown RBP14.4□□□□□ -0.1
CHRNB1-202ENST00000536404 MVPQ14764 893 aaKnown RBP14.4□□□□□ -0.1
CHRNB1-202ENST00000536404 ANTXR1Q9H6X2 564 aa14.4□□□□□ -0.1
CHRNB1-202ENST00000536404 RNF181Q9P0P0 153 aa14.4□□□□□ -0.1
CHRNB1-202ENST00000536404 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
CHRNB1-202ENST00000536404 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
CHRNB1-202ENST00000536404 RASSF7Q02833 373 aa14.39□□□□□ -0.11
CHRNB1-202ENST00000536404 TAF7Q15545 349 aaPredicted RBP14.39□□□□□ -0.11
CHRNB1-202ENST00000536404 DZIP3Q86Y13 1208 aaKnown RBP14.39□□□□□ -0.11
CHRNB1-202ENST00000536404 NMRK2Q9NPI5 230 aa14.39□□□□□ -0.11
CHRNB1-202ENST00000536404 H0YIN7 160 aa14.38□□□□□ -0.11
CHRNB1-202ENST00000536404 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
CHRNB1-202ENST00000536404 PTMSP20962 102 aa14.38□□□□□ -0.11
CHRNB1-202ENST00000536404 PRR5LQ6MZQ0 368 aa14.38□□□□□ -0.11
CHRNB1-202ENST00000536404 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
CHRNB1-202ENST00000536404 TTLL6Q8N841 843 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms