RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 XAGE3Q8WTP9 111 aa26.12■■□□□ 1.77
TRIM3-214ENST00000536344 RBM25P49756 843 aaKnown RBP26.11■■□□□ 1.77
TRIM3-214ENST00000536344 COPS6Q7L5N1 327 aa26.11■■□□□ 1.77
TRIM3-214ENST00000536344 SNX21Q969T3 373 aa26.11■■□□□ 1.77
TRIM3-214ENST00000536344 ANP32BQ92688 251 aaKnown RBP26.11■■□□□ 1.77
TRIM3-214ENST00000536344 DDX21Q9NR30 783 aaKnown RBP eCLIP26.11■■□□□ 1.77
TRIM3-214ENST00000536344 PPP1R42Q7Z4L9 355 aa26.1■■□□□ 1.77
TRIM3-214ENST00000536344 ATP8B2P98198 1209 aa26.1■■□□□ 1.77
TRIM3-214ENST00000536344 IL1RAPL2Q9NP60 686 aa26.1■■□□□ 1.77
TRIM3-214ENST00000536344 C5P01031 1676 aa26.1■■□□□ 1.77
TRIM3-214ENST00000536344 KSR2Q6VAB6 950 aa26.09■■□□□ 1.77
TRIM3-214ENST00000536344 RIC3Q7Z5B4 369 aa26.09■■□□□ 1.77
TRIM3-214ENST00000536344 C9orf78Q9NZ63 289 aaPredicted RBP26.09■■□□□ 1.77
TRIM3-214ENST00000536344 FMNL2Q96PY5 1086 aa26.09■■□□□ 1.77
TRIM3-214ENST00000536344 NCLP19338 710 aaKnown RBP26.08■■□□□ 1.77
TRIM3-214ENST00000536344 BMP2KLQ5H9B9 411 aa26.08■■□□□ 1.77
TRIM3-214ENST00000536344 HYPKQ9NX55 129 aa26.08■■□□□ 1.77
TRIM3-214ENST00000536344 A0A0G2JS52 829 aa26.08■■□□□ 1.77
TRIM3-214ENST00000536344 SRGAP3O43295 1099 aa26.08■■□□□ 1.77
TRIM3-214ENST00000536344 SNRPA1P09661 255 aaKnown RBP26.08■■□□□ 1.77
TRIM3-214ENST00000536344 CIZ1Q9ULV3 898 aaPredicted RBP26.08■■□□□ 1.77
TRIM3-214ENST00000536344 ADAMTS7Q9UKP4 1686 aa26.08■■□□□ 1.77
TRIM3-214ENST00000536344 PKD1L3Q7Z443 1732 aa26.06■■□□□ 1.76
TRIM3-214ENST00000536344 RBSNQ9H1K0 784 aa26.06■■□□□ 1.76
TRIM3-214ENST00000536344 CAVIN1Q6NZI2 390 aaKnown RBP26.06■■□□□ 1.76
TRIM3-214ENST00000536344 TBC1D9Q6ZT07 1266 aa26.06■■□□□ 1.76
TRIM3-214ENST00000536344 ZNF330Q9Y3S2 320 aaPredicted RBP26.06■■□□□ 1.76
TRIM3-214ENST00000536344 SURF6O75683 361 aaKnown RBP26.05■■□□□ 1.76
TRIM3-214ENST00000536344 BAG4O95429 457 aaKnown RBP26.04■■□□□ 1.76
TRIM3-214ENST00000536344 ABCC6O95255 1503 aa26.04■■□□□ 1.76
TRIM3-214ENST00000536344 TERF1P54274 439 aa26.04■■□□□ 1.76
TRIM3-214ENST00000536344 KLHL40Q2TBA0 621 aa26.04■■□□□ 1.76
TRIM3-214ENST00000536344 MYD88Q99836 296 aa26.04■■□□□ 1.76
TRIM3-214ENST00000536344 NOL7Q9UMY1 257 aaKnown RBP26.04■■□□□ 1.76
TRIM3-214ENST00000536344 ATP5J2-PTCD1G3V325 749 aa26.03■■□□□ 1.76
TRIM3-214ENST00000536344 A1BGP04217 495 aa26.03■■□□□ 1.76
TRIM3-214ENST00000536344 SYTL4Q96C24 671 aaPredicted RBP26.03■■□□□ 1.76
TRIM3-214ENST00000536344 CHMP4AQ9BY43 222 aa26.03■■□□□ 1.76
TRIM3-214ENST00000536344 TTC22Q5TAA0 569 aa26.02■■□□□ 1.76
TRIM3-214ENST00000536344 IGKV5-2P06315 115 aa26.02■■□□□ 1.76
TRIM3-214ENST00000536344 MCTP1Q6DN14 999 aa26.02■■□□□ 1.76
TRIM3-214ENST00000536344 LRRCC1Q9C099 1032 aa26.02■■□□□ 1.76
TRIM3-214ENST00000536344 PA2G4Q9UQ80 394 aaKnown RBP26.01■■□□□ 1.76
TRIM3-214ENST00000536344 PXDNLA1KZ92 1463 aa26.01■■□□□ 1.75
TRIM3-214ENST00000536344 NUTM1Q86Y26 1132 aa26.01■■□□□ 1.75
TRIM3-214ENST00000536344 MAP7D2Q96T17 732 aa26.01■■□□□ 1.75
TRIM3-214ENST00000536344 K7ELQ4 463 aaPredicted RBP26.01■■□□□ 1.75
TRIM3-214ENST00000536344 DDX58O95786 925 aaKnown RBP26.01■■□□□ 1.75
TRIM3-214ENST00000536344 ASAP1Q9ULH1 1129 aa26.01■■□□□ 1.75
TRIM3-214ENST00000536344 PRIM1P49642 420 aaKnown RBP26■■□□□ 1.75
TRIM3-214ENST00000536344 PARP4Q9UKK3 1724 aaKnown RBP26■■□□□ 1.75
TRIM3-214ENST00000536344 ZNF500O60304 480 aaPredicted RBP26■■□□□ 1.75
TRIM3-214ENST00000536344 SDSP20132 328 aa26■■□□□ 1.75
TRIM3-214ENST00000536344 ZSCAN23Q3MJ62 389 aa26■■□□□ 1.75
TRIM3-214ENST00000536344 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 NBPF26B4DH59 902 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 NBPF14Q5TI25 921 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 NBPF10Q6P3W6 841 aaKnown RBP25.99■■□□□ 1.75
TRIM3-214ENST00000536344 NBPF15Q8N660 670 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 PKP1Q13835 747 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 ANKRD13DQ6ZTN6 518 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 CHAMP1Q96JM3 812 aa25.99■■□□□ 1.75
TRIM3-214ENST00000536344 RBM27Q9P2N5 1060 aaKnown RBP25.99■■□□□ 1.75
TRIM3-214ENST00000536344 SMAP1Q8IYB5 467 aaPredicted RBP25.98■■□□□ 1.75
TRIM3-214ENST00000536344 SSH3Q8TE77 659 aa25.98■■□□□ 1.75
TRIM3-214ENST00000536344 SUCLG2Q96I99 432 aa25.98■■□□□ 1.75
TRIM3-214ENST00000536344 LRP10Q7Z4F1 713 aa25.98■■□□□ 1.75
TRIM3-214ENST00000536344 TSC1Q92574 1164 aa25.98■■□□□ 1.75
TRIM3-214ENST00000536344 TMOD3Q9NYL9 352 aa25.98■■□□□ 1.75
TRIM3-214ENST00000536344 GOLGA6L22H0YM25 854 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 PDE1AP54750 535 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 LINS1Q8NG48 757 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 CCDC9Q9Y3X0 531 aaKnown RBP25.97■■□□□ 1.75
TRIM3-214ENST00000536344 ERVV-2B6SEH9 535 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 TTLL7Q6ZT98 887 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 KLHDC4Q8TBB5 520 aa25.97■■□□□ 1.75
TRIM3-214ENST00000536344 PIGBQ92521 554 aa25.96■■□□□ 1.75
TRIM3-214ENST00000536344 IBTKQ9P2D0 1353 aaPredicted RBP25.96■■□□□ 1.75
TRIM3-214ENST00000536344 MRC1P22897 1456 aa25.96■■□□□ 1.75
TRIM3-214ENST00000536344 GRM8O00222 908 aa25.96■■□□□ 1.75
TRIM3-214ENST00000536344 MAP4K4O95819 1239 aaPredicted RBP25.96■■□□□ 1.75
TRIM3-214ENST00000536344 OS9Q13438 667 aaPredicted RBP25.96■■□□□ 1.75
TRIM3-214ENST00000536344 KAZALD1Q96I82 304 aa25.95■■□□□ 1.75
TRIM3-214ENST00000536344 BICC1Q9H694 974 aaKnown RBP25.95■■□□□ 1.75
TRIM3-214ENST00000536344 PDLIM2Q96JY6 352 aa25.95■■□□□ 1.74
TRIM3-214ENST00000536344 ZBTB3Q9H5J0 574 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 CDC45O75419 566 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 ZNF445P59923 1031 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 NEXNQ0ZGT2 675 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
TRIM3-214ENST00000536344 SIL1Q9H173 461 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 SHANK3Q9BYB0 1731 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 NEURL1BA8MQ27 555 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 ZKSCAN5Q9Y2L8 839 aa25.94■■□□□ 1.74
TRIM3-214ENST00000536344 ALDH1L1O75891 902 aa25.93■■□□□ 1.74
TRIM3-214ENST00000536344 PTMSP20962 102 aa25.93■■□□□ 1.74
TRIM3-214ENST00000536344 POLA2Q14181 598 aa25.93■■□□□ 1.74
TRIM3-214ENST00000536344 EPHA10Q5JZY3 1008 aa25.93■■□□□ 1.74
TRIM3-214ENST00000536344 UBAP1LF5GYI3 381 aa25.92■■□□□ 1.74
TRIM3-214ENST00000536344 MX1P20591 662 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms