RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 PRKAR2BP31323 418 aa11.29□□□□□ -0.6
CLPB-207ENST00000536297 DZIP3Q86Y13 1208 aaKnown RBP11.29□□□□□ -0.6
CLPB-207ENST00000536297 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
CLPB-207ENST00000536297 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
CLPB-207ENST00000536297 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 DDNO94850 711 aaPredicted RBP11.28□□□□□ -0.6
CLPB-207ENST00000536297 ST5P78524 1137 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
CLPB-207ENST00000536297 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 TAOK3Q9H2K8 898 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
CLPB-207ENST00000536297 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
CLPB-207ENST00000536297 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
CLPB-207ENST00000536297 SRGNP10124 158 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 MCM10Q7L590 875 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 MASTLQ96GX5 879 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.61
CLPB-207ENST00000536297 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
CLPB-207ENST00000536297 NBPF5PQ86XG9 351 aaPredicted RBP11.26□□□□□ -0.61
CLPB-207ENST00000536297 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
CLPB-207ENST00000536297 FAM177BA6PVY3 158 aa11.25□□□□□ -0.61
CLPB-207ENST00000536297 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
CLPB-207ENST00000536297 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPB-207ENST00000536297 DCTN1Q14203 1278 aa11.25□□□□□ -0.61
CLPB-207ENST00000536297 RTF1Q92541 710 aaKnown RBP11.25□□□□□ -0.61
CLPB-207ENST00000536297 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
CLPB-207ENST00000536297 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
CLPB-207ENST00000536297 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
CLPB-207ENST00000536297 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
CLPB-207ENST00000536297 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
CLPB-207ENST00000536297 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
CLPB-207ENST00000536297 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
CLPB-207ENST00000536297 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
CLPB-207ENST00000536297 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
CLPB-207ENST00000536297 CLEC4GQ6UXB4 293 aa11.23□□□□□ -0.61
CLPB-207ENST00000536297 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
CLPB-207ENST00000536297 ZNF277Q9NRM2 450 aaPredicted RBP11.23□□□□□ -0.61
CLPB-207ENST00000536297 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
CLPB-207ENST00000536297 NIP7Q9Y221 180 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLPB-207ENST00000536297 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
CLPB-207ENST00000536297 NPR1P16066 1061 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 HLFQ16534 295 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 ZNF541Q9H0D2 1346 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
CLPB-207ENST00000536297 IQCA1LA6NCM1 817 aa11.21□□□□□ -0.61
CLPB-207ENST00000536297 ANP32CO43423 234 aa11.21□□□□□ -0.61
CLPB-207ENST00000536297 FKBP4Q02790 459 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLPB-207ENST00000536297 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.61
CLPB-207ENST00000536297 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
CLPB-207ENST00000536297 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
CLPB-207ENST00000536297 SCN4AP35499 1836 aa11.21□□□□□ -0.62
CLPB-207ENST00000536297 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
CLPB-207ENST00000536297 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
CLPB-207ENST00000536297 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
CLPB-207ENST00000536297 L3MBTL3Q96JM7 780 aaPredicted RBP11.2□□□□□ -0.62
CLPB-207ENST00000536297 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
CLPB-207ENST00000536297 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
CLPB-207ENST00000536297 PASKQ96RG2 1323 aa11.19□□□□□ -0.62
CLPB-207ENST00000536297 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
CLPB-207ENST00000536297 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
CLPB-207ENST00000536297 RTKN2Q8IZC4 609 aa11.19□□□□□ -0.62
CLPB-207ENST00000536297 SYNE4Q8N205 404 aa11.19□□□□□ -0.62
CLPB-207ENST00000536297 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 RNF123Q5XPI4 1314 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 FOXN1O15353 648 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
CLPB-207ENST00000536297 ALDH1B1P30837 517 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 EPHX2P34913 555 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 IARSP41252 1262 aaKnown RBP11.18□□□□□ -0.62
CLPB-207ENST00000536297 HACL1Q9UJ83 578 aa11.18□□□□□ -0.62
CLPB-207ENST00000536297 ABCC12Q96J65 1359 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 NUP98P52948 1817 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 TMEM88BA6NKF7 163 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 ITGBL1O95965 494 aaPredicted RBP11.17□□□□□ -0.62
CLPB-207ENST00000536297 VEGFBP49765 207 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 SLC51AQ86UW1 340 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
CLPB-207ENST00000536297 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 ADAMTSL1Q8N6G6 1762 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 PCNTO95613 3336 aa11.17□□□□□ -0.62
CLPB-207ENST00000536297 FZD9O00144 591 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 RGL2O15211 777 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 MYL6BP14649 208 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 GPTP24298 496 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 MAP1SQ66K74 1059 aaPredicted RBP11.16□□□□□ -0.62
CLPB-207ENST00000536297 TTLL7Q6ZT98 887 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
CLPB-207ENST00000536297 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
CLPB-207ENST00000536297 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
CLPB-207ENST00000536297 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
CLPB-207ENST00000536297 COL4A5P29400 1685 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms