RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 NFKBIEO00221 500 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 C21orf2O43822 256 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
CCND1-202ENST00000535993 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 SBF1O95248 1867 aa16.1■□□□□ 0.17
CCND1-202ENST00000535993 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
CCND1-202ENST00000535993 SRGNP10124 158 aa16.09■□□□□ 0.17
CCND1-202ENST00000535993 RALBP1Q15311 655 aa16.09■□□□□ 0.17
CCND1-202ENST00000535993 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CCND1-202ENST00000535993 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
CCND1-202ENST00000535993 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCND1-202ENST00000535993 PRELPP51888 382 aa16.08■□□□□ 0.16
CCND1-202ENST00000535993 VEGFAP15692 232 aaPredicted RBP16.07■□□□□ 0.16
CCND1-202ENST00000535993 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
CCND1-202ENST00000535993 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
CCND1-202ENST00000535993 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
CCND1-202ENST00000535993 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
CCND1-202ENST00000535993 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
CCND1-202ENST00000535993 ANKRD31Q8N7Z5 1873 aa16.06■□□□□ 0.16
CCND1-202ENST00000535993 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
CCND1-202ENST00000535993 NPR1P16066 1061 aa16.06■□□□□ 0.16
CCND1-202ENST00000535993 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
CCND1-202ENST00000535993 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
CCND1-202ENST00000535993 BCORQ6W2J9 1755 aa16.05■□□□□ 0.16
CCND1-202ENST00000535993 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
CCND1-202ENST00000535993 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
CCND1-202ENST00000535993 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
CCND1-202ENST00000535993 THUMPD2Q9BTF0 503 aaKnown RBP16.05■□□□□ 0.16
CCND1-202ENST00000535993 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
CCND1-202ENST00000535993 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
CCND1-202ENST00000535993 HLFQ16534 295 aa16.04■□□□□ 0.16
CCND1-202ENST00000535993 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
CCND1-202ENST00000535993 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
CCND1-202ENST00000535993 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
CCND1-202ENST00000535993 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
CCND1-202ENST00000535993 RIPK4P57078 832 aa16.03■□□□□ 0.16
CCND1-202ENST00000535993 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
CCND1-202ENST00000535993 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
CCND1-202ENST00000535993 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
CCND1-202ENST00000535993 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
CCND1-202ENST00000535993 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
CCND1-202ENST00000535993 LMOD3Q0VAK6 560 aa16.02■□□□□ 0.16
CCND1-202ENST00000535993 CCDC93Q567U6 631 aa16.02■□□□□ 0.16
CCND1-202ENST00000535993 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
CCND1-202ENST00000535993 MYL6BP14649 208 aa16.01■□□□□ 0.15
CCND1-202ENST00000535993 ALDH1B1P30837 517 aa16.01■□□□□ 0.15
CCND1-202ENST00000535993 C7orf43Q8WVR3 580 aa16.01■□□□□ 0.15
CCND1-202ENST00000535993 BABAM1Q9NWV8 329 aa16.01■□□□□ 0.15
CCND1-202ENST00000535993 TTLL7Q6ZT98 887 aa16■□□□□ 0.15
CCND1-202ENST00000535993 RTKN2Q8IZC4 609 aa16■□□□□ 0.15
CCND1-202ENST00000535993 SLX4Q8IY92 1834 aa16■□□□□ 0.15
CCND1-202ENST00000535993 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
CCND1-202ENST00000535993 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
CCND1-202ENST00000535993 TMPOP42166 694 aaKnown RBP15.99■□□□□ 0.15
CCND1-202ENST00000535993 LAMB4A4D0S4 1761 aa15.99■□□□□ 0.15
CCND1-202ENST00000535993 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
CCND1-202ENST00000535993 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
CCND1-202ENST00000535993 POTECB2RU33 542 aa15.98■□□□□ 0.15
CCND1-202ENST00000535993 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCND1-202ENST00000535993 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
CCND1-202ENST00000535993 TIAM2Q8IVF5 1701 aa15.98■□□□□ 0.15
CCND1-202ENST00000535993 KLRG1Q96E93 195 aa15.98■□□□□ 0.15
CCND1-202ENST00000535993 ZBTB3Q9H5J0 574 aa15.98■□□□□ 0.15
CCND1-202ENST00000535993 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
CCND1-202ENST00000535993 GPTP24298 496 aa15.97■□□□□ 0.15
CCND1-202ENST00000535993 HTRA3P83110 453 aa15.97■□□□□ 0.15
CCND1-202ENST00000535993 CRY2Q49AN0 593 aa15.97■□□□□ 0.15
CCND1-202ENST00000535993 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
CCND1-202ENST00000535993 NUTM1Q86Y26 1132 aa15.97■□□□□ 0.15
CCND1-202ENST00000535993 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
CCND1-202ENST00000535993 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
CCND1-202ENST00000535993 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCND1-202ENST00000535993 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
CCND1-202ENST00000535993 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
CCND1-202ENST00000535993 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.15
CCND1-202ENST00000535993 RPGRQ92834 1020 aaKnown RBP15.96■□□□□ 0.15
CCND1-202ENST00000535993 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
CCND1-202ENST00000535993 WDR90Q96KV7 1748 aa15.96■□□□□ 0.15
CCND1-202ENST00000535993 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.14
CCND1-202ENST00000535993 ARFGEF2Q9Y6D5 1785 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 IQCA1LA6NCM1 817 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
CCND1-202ENST00000535993 UBN2Q6ZU65 1347 aa15.94■□□□□ 0.14
CCND1-202ENST00000535993 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
CCND1-202ENST00000535993 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
CCND1-202ENST00000535993 OLFM4Q6UX06 510 aa15.94■□□□□ 0.14
CCND1-202ENST00000535993 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
CCND1-202ENST00000535993 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
CCND1-202ENST00000535993 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
CCND1-202ENST00000535993 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
CCND1-202ENST00000535993 PDIA6Q15084 440 aa15.93■□□□□ 0.14
CCND1-202ENST00000535993 GRIPAP1Q4V328 841 aa15.93■□□□□ 0.14
CCND1-202ENST00000535993 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
CCND1-202ENST00000535993 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
CCND1-202ENST00000535993 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms