RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 STYK1Q6J9G0 422 aa17.31■□□□□ 0.36
TNFRSF1A-207ENST00000535958 PRPF40BQ6NWY9 871 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-207ENST00000535958 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
TNFRSF1A-207ENST00000535958 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-207ENST00000535958 LTBP3Q9NS15 1303 aa17.3■□□□□ 0.36
TNFRSF1A-207ENST00000535958 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-207ENST00000535958 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF1A-207ENST00000535958 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
TNFRSF1A-207ENST00000535958 NEFMP07197 916 aa17.29■□□□□ 0.36
TNFRSF1A-207ENST00000535958 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-207ENST00000535958 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
TNFRSF1A-207ENST00000535958 PHACTR3Q96KR7 559 aa17.29■□□□□ 0.36
TNFRSF1A-207ENST00000535958 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
TNFRSF1A-207ENST00000535958 KCNQ3O43525 872 aa17.28■□□□□ 0.36
TNFRSF1A-207ENST00000535958 SRGNP10124 158 aa17.28■□□□□ 0.36
TNFRSF1A-207ENST00000535958 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-207ENST00000535958 COL13A1Q5TAT6 717 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
TNFRSF1A-207ENST00000535958 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CAPN15O75808 1086 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CCDC93Q567U6 631 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 MCM10Q7L590 875 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
TNFRSF1A-207ENST00000535958 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 NPR1P16066 1061 aa17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNFRSF1A-207ENST00000535958 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1A-207ENST00000535958 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
TNFRSF1A-207ENST00000535958 FAM177BA6PVY3 158 aa17.24■□□□□ 0.35
TNFRSF1A-207ENST00000535958 POTECB2RU33 542 aa17.24■□□□□ 0.35
TNFRSF1A-207ENST00000535958 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
TNFRSF1A-207ENST00000535958 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-207ENST00000535958 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
TNFRSF1A-207ENST00000535958 RGL2O15211 777 aa17.22■□□□□ 0.35
TNFRSF1A-207ENST00000535958 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
TNFRSF1A-207ENST00000535958 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
TNFRSF1A-207ENST00000535958 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
TNFRSF1A-207ENST00000535958 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
TNFRSF1A-207ENST00000535958 ALDH1B1P30837 517 aa17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 LDHDQ86WU2 507 aa17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 RTKN2Q8IZC4 609 aa17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 SCN4AP35499 1836 aa17.21■□□□□ 0.35
TNFRSF1A-207ENST00000535958 PCNTO95613 3336 aa17.2■□□□□ 0.34
TNFRSF1A-207ENST00000535958 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
TNFRSF1A-207ENST00000535958 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-207ENST00000535958 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
TNFRSF1A-207ENST00000535958 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
TNFRSF1A-207ENST00000535958 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 IARSP41252 1262 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 AIDAQ96BJ3 306 aa17.17■□□□□ 0.34
TNFRSF1A-207ENST00000535958 HLFQ16534 295 aa17.16■□□□□ 0.34
TNFRSF1A-207ENST00000535958 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
TNFRSF1A-207ENST00000535958 ZNF541Q9H0D2 1346 aa17.16■□□□□ 0.34
TNFRSF1A-207ENST00000535958 EPHX2P34913 555 aa17.15■□□□□ 0.34
TNFRSF1A-207ENST00000535958 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-207ENST00000535958 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
TNFRSF1A-207ENST00000535958 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
TNFRSF1A-207ENST00000535958 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
TNFRSF1A-207ENST00000535958 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 OLFM4Q6UX06 510 aa17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
TNFRSF1A-207ENST00000535958 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 MYL6BP14649 208 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
TNFRSF1A-207ENST00000535958 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
TNFRSF1A-207ENST00000535958 GPTP24298 496 aa17.12■□□□□ 0.33
TNFRSF1A-207ENST00000535958 GPC2Q8N158 579 aa17.12■□□□□ 0.33
TNFRSF1A-207ENST00000535958 PSMD1Q99460 953 aa17.12■□□□□ 0.33
TNFRSF1A-207ENST00000535958 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
TNFRSF1A-207ENST00000535958 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms