RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SIPA1L3O60292 1781 aaPredicted RBP10.81□□□□□ -0.68
CHFR-211ENST00000535897 IQCA1LA6NCM1 817 aa10.81□□□□□ -0.68
CHFR-211ENST00000535897 A1BGP04217 495 aa10.81□□□□□ -0.68
CHFR-211ENST00000535897 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
CHFR-211ENST00000535897 DZIP3Q86Y13 1208 aaKnown RBP10.81□□□□□ -0.68
CHFR-211ENST00000535897 IL17REQ8NFR9 667 aa10.81□□□□□ -0.68
CHFR-211ENST00000535897 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 SRGNP10124 158 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
CHFR-211ENST00000535897 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
CHFR-211ENST00000535897 NBPF5PQ86XG9 351 aaPredicted RBP10.8□□□□□ -0.68
CHFR-211ENST00000535897 MASTLQ96GX5 879 aa10.8□□□□□ -0.68
CHFR-211ENST00000535897 CCDC93Q567U6 631 aa10.79□□□□□ -0.68
CHFR-211ENST00000535897 AIDAQ96BJ3 306 aa10.79□□□□□ -0.68
CHFR-211ENST00000535897 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
CHFR-211ENST00000535897 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
CHFR-211ENST00000535897 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
CHFR-211ENST00000535897 SCN4AP35499 1836 aa10.79□□□□□ -0.68
CHFR-211ENST00000535897 FAM177BA6PVY3 158 aa10.78□□□□□ -0.68
CHFR-211ENST00000535897 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
CHFR-211ENST00000535897 CNTNAP1P78357 1384 aa10.77□□□□□ -0.68
CHFR-211ENST00000535897 FOXN1O15353 648 aa10.77□□□□□ -0.69
CHFR-211ENST00000535897 KCNQ3O43525 872 aa10.77□□□□□ -0.69
CHFR-211ENST00000535897 NPR1P16066 1061 aa10.77□□□□□ -0.69
CHFR-211ENST00000535897 PRKAR2BP31323 418 aa10.77□□□□□ -0.69
CHFR-211ENST00000535897 TAF1DQ9H5J8 278 aaPredicted RBP10.77□□□□□ -0.69
CHFR-211ENST00000535897 ZNF277Q9NRM2 450 aaPredicted RBP10.77□□□□□ -0.69
CHFR-211ENST00000535897 TMEM88BA6NKF7 163 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
CHFR-211ENST00000535897 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
CHFR-211ENST00000535897 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHFR-211ENST00000535897 TPTE2Q6XPS3 522 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 RTF1Q92541 710 aaKnown RBP10.76□□□□□ -0.69
CHFR-211ENST00000535897 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
CHFR-211ENST00000535897 PHACTR3Q96KR7 559 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHFR-211ENST00000535897 USP16Q9Y5T5 823 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 ZNF541Q9H0D2 1346 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
CHFR-211ENST00000535897 PRAMEF22A3QJZ6 481 aa10.75□□□□□ -0.69
CHFR-211ENST00000535897 SNRPA1P09661 255 aaKnown RBP10.75□□□□□ -0.69
CHFR-211ENST00000535897 EPHX2P34913 555 aa10.75□□□□□ -0.69
CHFR-211ENST00000535897 OLFM4Q6UX06 510 aa10.75□□□□□ -0.69
CHFR-211ENST00000535897 CLEC4GQ6UXB4 293 aa10.75□□□□□ -0.69
CHFR-211ENST00000535897 IARSP41252 1262 aaKnown RBP10.74□□□□□ -0.69
CHFR-211ENST00000535897 CTCFP49711 727 aaPredicted RBP10.74□□□□□ -0.69
CHFR-211ENST00000535897 VEGFBP49765 207 aa10.74□□□□□ -0.69
CHFR-211ENST00000535897 MCM10Q7L590 875 aa10.74□□□□□ -0.69
CHFR-211ENST00000535897 PNMA8AQ86V59 439 aaPredicted RBP10.74□□□□□ -0.69
CHFR-211ENST00000535897 RTKN2Q8IZC4 609 aa10.74□□□□□ -0.69
CHFR-211ENST00000535897 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
CHFR-211ENST00000535897 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
CHFR-211ENST00000535897 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
CHFR-211ENST00000535897 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
CHFR-211ENST00000535897 ALDH1B1P30837 517 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHFR-211ENST00000535897 MAP1SQ66K74 1059 aaPredicted RBP10.73□□□□□ -0.69
CHFR-211ENST00000535897 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 ABT1Q9ULW3 272 aaKnown RBP10.73□□□□□ -0.69
CHFR-211ENST00000535897 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 GJA3Q9Y6H8 435 aa10.73□□□□□ -0.69
CHFR-211ENST00000535897 LBX1P52954 281 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 PAXIP1Q6ZW49 1069 aaPredicted RBP10.72□□□□□ -0.69
CHFR-211ENST00000535897 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 GPC2Q8N158 579 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 SYNE4Q8N205 404 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 NGEFQ8N5V2 710 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 NPC1L1Q9UHC9 1359 aa10.72□□□□□ -0.69
CHFR-211ENST00000535897 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.69
CHFR-211ENST00000535897 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 LMOD1P29536 600 aaPredicted RBP10.71□□□□□ -0.69
CHFR-211ENST00000535897 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.69
CHFR-211ENST00000535897 GRM1Q13255 1194 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 DCTN1Q14203 1278 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 NBPF10Q6P3W6 841 aaKnown RBP10.71□□□□□ -0.69
CHFR-211ENST00000535897 NBPF15Q8N660 670 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 ADAMTSL1Q8N6G6 1762 aa10.71□□□□□ -0.69
CHFR-211ENST00000535897 RPGRQ92834 1020 aaKnown RBP10.71□□□□□ -0.69
CHFR-211ENST00000535897 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 FZD9O00144 591 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 HLFQ16534 295 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 NYXQ9GZU5 481 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
CHFR-211ENST00000535897 ABCC12Q96J65 1359 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 WDR33Q9C0J8 1336 aaKnown RBP10.69□□□□□ -0.7
CHFR-211ENST00000535897 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
CHFR-211ENST00000535897 RGL2O15211 777 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 MAP2K1Q02750 393 aaPredicted RBP10.69□□□□□ -0.7
CHFR-211ENST00000535897 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms