RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 PCDH11XQ9BZA7 1347 aa10.86□□□□□ -0.67
SORL1-213ENST00000534754 PCDH11YQ9BZA8 1340 aa10.86□□□□□ -0.67
SORL1-213ENST00000534754 PAPPAQ13219 1627 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 PHKG2P15735 406 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
SORL1-213ENST00000534754 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 PKP1Q13835 747 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 CASC1Q6TDU7 716 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 GPT2Q8TD30 523 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 SPG7Q9UQ90 795 aa10.85□□□□□ -0.67
SORL1-213ENST00000534754 MRC1P22897 1456 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 UBR2Q8IWV8 1755 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
SORL1-213ENST00000534754 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
SORL1-213ENST00000534754 MAP3K5Q99683 1374 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 GNAI1P63096 354 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 DCTPP1Q9H773 170 aa10.84□□□□□ -0.67
SORL1-213ENST00000534754 MBD3O95983 291 aa10.83□□□□□ -0.68
SORL1-213ENST00000534754 NFE2L2Q16236 605 aa10.83□□□□□ -0.68
SORL1-213ENST00000534754 IFT57Q9NWB7 429 aa10.83□□□□□ -0.68
SORL1-213ENST00000534754 LY75O60449 1722 aa10.83□□□□□ -0.68
SORL1-213ENST00000534754 MPRIPQ6WCQ1 1025 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 ILDR2Q71H61 639 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 PTF1AQ7RTS3 328 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 IFNL2Q8IZJ0 200 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 ZGPATQ8N5A5 531 aaKnown RBP10.82□□□□□ -0.68
SORL1-213ENST00000534754 TSPYL6Q8N831 410 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 TMEM63CQ9P1W3 806 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 SYCE3A1L190 88 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 REC8O95072 547 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
SORL1-213ENST00000534754 AKAP4Q5JQC9 854 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 LGR6Q9HBX8 967 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 PRDM4Q9UKN5 801 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 BCL9O00512 1426 aa10.82□□□□□ -0.68
SORL1-213ENST00000534754 SMAP1Q8IYB5 467 aaPredicted RBP10.81□□□□□ -0.68
SORL1-213ENST00000534754 THUMPD2Q9BTF0 503 aaKnown RBP10.81□□□□□ -0.68
SORL1-213ENST00000534754 TAF1LQ8IZX4 1826 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 CEMIPQ8WUJ3 1361 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 TWISTNBQ3B726 338 aaPredicted RBP10.81□□□□□ -0.68
SORL1-213ENST00000534754 C1orf141Q5JVX7 400 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 MCM10Q7L590 875 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 IL17REQ8NFR9 667 aa10.81□□□□□ -0.68
SORL1-213ENST00000534754 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 C5P01031 1676 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
SORL1-213ENST00000534754 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
SORL1-213ENST00000534754 RNMTO43148 476 aaKnown RBP10.8□□□□□ -0.68
SORL1-213ENST00000534754 KCNQ2O43526 872 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 SDSP20132 328 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 ACSBG1Q96GR2 724 aa10.8□□□□□ -0.68
SORL1-213ENST00000534754 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
SORL1-213ENST00000534754 KIAA2012Q0VF49 1180 aa10.79□□□□□ -0.68
SORL1-213ENST00000534754 C16orf71Q8IYS4 520 aaPredicted RBP10.79□□□□□ -0.68
SORL1-213ENST00000534754 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
SORL1-213ENST00000534754 SYAP1Q96A49 352 aaPredicted RBP10.79□□□□□ -0.68
SORL1-213ENST00000534754 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
SORL1-213ENST00000534754 ERC2O15083 957 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 TSPY26PQ9H489 355 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 TJP1Q07157 1748 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 MCM2P49736 904 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 RPAP2Q8IXW5 612 aaPredicted RBP10.78□□□□□ -0.68
SORL1-213ENST00000534754 RNF214Q8ND24 703 aa10.78□□□□□ -0.68
SORL1-213ENST00000534754 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
SORL1-213ENST00000534754 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.68
SORL1-213ENST00000534754 C8orf58Q8NAV2 365 aa10.77□□□□□ -0.68
SORL1-213ENST00000534754 OTUD7AQ8TE49 926 aaPredicted RBP10.77□□□□□ -0.68
SORL1-213ENST00000534754 ATP10DQ9P241 1426 aa10.77□□□□□ -0.69
SORL1-213ENST00000534754 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
SORL1-213ENST00000534754 RREB1Q92766 1687 aa10.77□□□□□ -0.69
SORL1-213ENST00000534754 PHF14O94880 888 aa10.77□□□□□ -0.69
SORL1-213ENST00000534754 LAMB4A4D0S4 1761 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 TRIM37O94972 964 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 BRD1O95696 1058 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 NFATC2IPQ8NCF5 419 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 SYTL4Q96C24 671 aaPredicted RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 CHAMP1Q96JM3 812 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 CCDC94Q9BW85 323 aaPredicted RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.76□□□□□ -0.69
SORL1-213ENST00000534754 ZNF831Q5JPB2 1677 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 KCPQ6ZWJ8 1503 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 CEP85Q6P2H3 762 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
SORL1-213ENST00000534754 PIGBQ92521 554 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms