RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
USF1-211ENST00000534633 VEGFAP15692 232 aaPredicted RBP16.71■□□□□ 0.27
USF1-211ENST00000534633 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 NPHP1O15259 732 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 C21orf2O43822 256 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 ST5P78524 1137 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 MCM10Q7L590 875 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 KLRG1Q96E93 195 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
USF1-211ENST00000534633 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
USF1-211ENST00000534633 CNKSR1Q969H4 720 aa16.69■□□□□ 0.26
USF1-211ENST00000534633 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
USF1-211ENST00000534633 PRAMEF22A3QJZ6 481 aa16.68■□□□□ 0.26
USF1-211ENST00000534633 RGL2O15211 777 aa16.68■□□□□ 0.26
USF1-211ENST00000534633 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
USF1-211ENST00000534633 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
USF1-211ENST00000534633 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
USF1-211ENST00000534633 SRGNP10124 158 aa16.67■□□□□ 0.26
USF1-211ENST00000534633 HTRA3P83110 453 aa16.67■□□□□ 0.26
USF1-211ENST00000534633 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
USF1-211ENST00000534633 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
USF1-211ENST00000534633 NUP98P52948 1817 aa16.67■□□□□ 0.26
USF1-211ENST00000534633 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
USF1-211ENST00000534633 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
USF1-211ENST00000534633 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
USF1-211ENST00000534633 NBPF5PQ86XG9 351 aaPredicted RBP16.66■□□□□ 0.26
USF1-211ENST00000534633 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
USF1-211ENST00000534633 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
USF1-211ENST00000534633 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
USF1-211ENST00000534633 SCN4AP35499 1836 aa16.64■□□□□ 0.25
USF1-211ENST00000534633 POTECB2RU33 542 aa16.64■□□□□ 0.25
USF1-211ENST00000534633 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
USF1-211ENST00000534633 NEFMP07197 916 aa16.64■□□□□ 0.25
USF1-211ENST00000534633 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
USF1-211ENST00000534633 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
USF1-211ENST00000534633 PCNTO95613 3336 aa16.63■□□□□ 0.25
USF1-211ENST00000534633 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
USF1-211ENST00000534633 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
USF1-211ENST00000534633 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
USF1-211ENST00000534633 NPR1P16066 1061 aa16.62■□□□□ 0.25
USF1-211ENST00000534633 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
USF1-211ENST00000534633 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
USF1-211ENST00000534633 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
USF1-211ENST00000534633 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
USF1-211ENST00000534633 HLFQ16534 295 aa16.59■□□□□ 0.25
USF1-211ENST00000534633 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
USF1-211ENST00000534633 NFE2L2Q16236 605 aa16.58■□□□□ 0.24
USF1-211ENST00000534633 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
USF1-211ENST00000534633 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
USF1-211ENST00000534633 ERVV-1B6SEH8 477 aa16.57■□□□□ 0.24
USF1-211ENST00000534633 GTF2E1P29083 439 aaPredicted RBP16.57■□□□□ 0.24
USF1-211ENST00000534633 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
USF1-211ENST00000534633 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
USF1-211ENST00000534633 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
USF1-211ENST00000534633 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
USF1-211ENST00000534633 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
USF1-211ENST00000534633 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
USF1-211ENST00000534633 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
USF1-211ENST00000534633 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
USF1-211ENST00000534633 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
USF1-211ENST00000534633 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
USF1-211ENST00000534633 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
USF1-211ENST00000534633 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
USF1-211ENST00000534633 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
USF1-211ENST00000534633 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
USF1-211ENST00000534633 RALBP1Q15311 655 aa16.54■□□□□ 0.24
USF1-211ENST00000534633 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
USF1-211ENST00000534633 NGEFQ8N5V2 710 aa16.54■□□□□ 0.24
USF1-211ENST00000534633 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
USF1-211ENST00000534633 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
USF1-211ENST00000534633 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 ABCC12Q96J65 1359 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
USF1-211ENST00000534633 PRKRIP1Q9H875 184 aaPredicted RBP16.53■□□□□ 0.24
USF1-211ENST00000534633 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
USF1-211ENST00000534633 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 ADAMTSL1Q8N6G6 1762 aa16.53■□□□□ 0.24
USF1-211ENST00000534633 MYL6BP14649 208 aa16.52■□□□□ 0.24
USF1-211ENST00000534633 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
USF1-211ENST00000534633 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
USF1-211ENST00000534633 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
USF1-211ENST00000534633 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
USF1-211ENST00000534633 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
USF1-211ENST00000534633 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
USF1-211ENST00000534633 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
USF1-211ENST00000534633 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
USF1-211ENST00000534633 PSMD1Q99460 953 aa16.51■□□□□ 0.23
USF1-211ENST00000534633 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
USF1-211ENST00000534633 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
USF1-211ENST00000534633 FZD9O00144 591 aa16.5■□□□□ 0.23
USF1-211ENST00000534633 HSPA1AP0DMV8 641 aaKnown RBP16.5■□□□□ 0.23
USF1-211ENST00000534633 HSPA1BP0DMV9 641 aaKnown RBP16.5■□□□□ 0.23
USF1-211ENST00000534633 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
USF1-211ENST00000534633 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms