RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 WDR90Q96KV7 1748 aa23.53■■□□□ 1.36
RECQL4-207ENST00000534538 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
RECQL4-207ENST00000534538 ZNF652Q9Y2D9 606 aa23.52■■□□□ 1.36
RECQL4-207ENST00000534538 LTBP3Q9NS15 1303 aa23.52■■□□□ 1.36
RECQL4-207ENST00000534538 PIP4K2AP48426 406 aaPredicted RBP23.51■■□□□ 1.35
RECQL4-207ENST00000534538 DCTN1Q14203 1278 aa23.51■■□□□ 1.35
RECQL4-207ENST00000534538 MASTLQ96GX5 879 aa23.51■■□□□ 1.35
RECQL4-207ENST00000534538 CCDC88AQ3V6T2 1871 aa23.51■■□□□ 1.35
RECQL4-207ENST00000534538 HTRA3P83110 453 aa23.5■■□□□ 1.35
RECQL4-207ENST00000534538 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
RECQL4-207ENST00000534538 SOGA3Q5TF21 947 aa23.5■■□□□ 1.35
RECQL4-207ENST00000534538 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
RECQL4-207ENST00000534538 JMYQ8N9B5 988 aa23.5■■□□□ 1.35
RECQL4-207ENST00000534538 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
RECQL4-207ENST00000534538 KLRG2A4D1S0 409 aaPredicted RBP23.49■■□□□ 1.35
RECQL4-207ENST00000534538 POTECB2RU33 542 aa23.49■■□□□ 1.35
RECQL4-207ENST00000534538 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
RECQL4-207ENST00000534538 PRPF40BQ6NWY9 871 aaKnown RBP23.49■■□□□ 1.35
RECQL4-207ENST00000534538 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
RECQL4-207ENST00000534538 NBPF15Q8N660 670 aa23.49■■□□□ 1.35
RECQL4-207ENST00000534538 COL11A2P13942 1736 aaPredicted RBP23.48■■□□□ 1.35
RECQL4-207ENST00000534538 BCORQ6W2J9 1755 aa23.48■■□□□ 1.35
RECQL4-207ENST00000534538 FER1L6Q2WGJ9 1857 aa23.48■■□□□ 1.35
RECQL4-207ENST00000534538 TAOK3Q9H2K8 898 aa23.48■■□□□ 1.35
RECQL4-207ENST00000534538 TPTE2Q6XPS3 522 aa23.47■■□□□ 1.35
RECQL4-207ENST00000534538 TIAM2Q8IVF5 1701 aa23.46■■□□□ 1.35
RECQL4-207ENST00000534538 PNISRQ8TF01 805 aaKnown RBP23.46■■□□□ 1.35
RECQL4-207ENST00000534538 C7orf43Q8WVR3 580 aa23.46■■□□□ 1.35
RECQL4-207ENST00000534538 NEFMP07197 916 aa23.45■■□□□ 1.34
RECQL4-207ENST00000534538 NPR1P16066 1061 aa23.45■■□□□ 1.34
RECQL4-207ENST00000534538 NIP7Q9Y221 180 aaKnown RBP eCLIP23.45■■□□□ 1.34
RECQL4-207ENST00000534538 DICER1Q9UPY3 1922 aaKnown RBP23.45■■□□□ 1.34
RECQL4-207ENST00000534538 SLX4Q8IY92 1834 aa23.45■■□□□ 1.34
RECQL4-207ENST00000534538 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
RECQL4-207ENST00000534538 PLEKHF1Q96S99 279 aa23.42■■□□□ 1.34
RECQL4-207ENST00000534538 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
RECQL4-207ENST00000534538 HLFQ16534 295 aa23.4■■□□□ 1.34
RECQL4-207ENST00000534538 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
RECQL4-207ENST00000534538 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
RECQL4-207ENST00000534538 ERVV-1B6SEH8 477 aa23.39■■□□□ 1.33
RECQL4-207ENST00000534538 EIF4A1P60842 406 aaKnown RBP23.39■■□□□ 1.33
RECQL4-207ENST00000534538 DDNO94850 711 aaPredicted RBP23.38■■□□□ 1.33
RECQL4-207ENST00000534538 ALDH1B1P30837 517 aa23.38■■□□□ 1.33
RECQL4-207ENST00000534538 NFE2L2Q16236 605 aa23.38■■□□□ 1.33
RECQL4-207ENST00000534538 PCNTO95613 3336 aa23.37■■□□□ 1.33
RECQL4-207ENST00000534538 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.33
RECQL4-207ENST00000534538 RTKN2Q8IZC4 609 aa23.37■■□□□ 1.33
RECQL4-207ENST00000534538 FAM177BA6PVY3 158 aa23.36■■□□□ 1.33
RECQL4-207ENST00000534538 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
RECQL4-207ENST00000534538 CHADLQ6NUI6 762 aa23.36■■□□□ 1.33
RECQL4-207ENST00000534538 NYXQ9GZU5 481 aa23.36■■□□□ 1.33
RECQL4-207ENST00000534538 L3MBTL3Q96JM7 780 aaPredicted RBP23.35■■□□□ 1.33
RECQL4-207ENST00000534538 MAP3K15Q6ZN16 1313 aa23.34■■□□□ 1.33
RECQL4-207ENST00000534538 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
RECQL4-207ENST00000534538 IQCA1LA6NCM1 817 aa23.34■■□□□ 1.33
RECQL4-207ENST00000534538 RRP7AQ9Y3A4 280 aaKnown RBP23.34■■□□□ 1.33
RECQL4-207ENST00000534538 CACNA1SQ13698 1873 aa23.34■■□□□ 1.33
RECQL4-207ENST00000534538 LAMB4A4D0S4 1761 aa23.33■■□□□ 1.33
RECQL4-207ENST00000534538 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.33
RECQL4-207ENST00000534538 CRY2Q49AN0 593 aa23.33■■□□□ 1.33
RECQL4-207ENST00000534538 NGEFQ8N5V2 710 aa23.33■■□□□ 1.33
RECQL4-207ENST00000534538 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
RECQL4-207ENST00000534538 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
RECQL4-207ENST00000534538 TTLL7Q6ZT98 887 aa23.32■■□□□ 1.32
RECQL4-207ENST00000534538 ZNF277Q9NRM2 450 aaPredicted RBP23.32■■□□□ 1.32
RECQL4-207ENST00000534538 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
RECQL4-207ENST00000534538 OLFM4Q6UX06 510 aa23.31■■□□□ 1.32
RECQL4-207ENST00000534538 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
RECQL4-207ENST00000534538 TAF1DQ9H5J8 278 aaPredicted RBP23.3■■□□□ 1.32
RECQL4-207ENST00000534538 CREBZFQ9NS37 354 aa23.3■■□□□ 1.32
RECQL4-207ENST00000534538 POTEIP0CG38 1075 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 POTEJP0CG39 1038 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 MYL6BP14649 208 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 COL13A1Q5TAT6 717 aaPredicted RBP23.29■■□□□ 1.32
RECQL4-207ENST00000534538 CC2D2BQ6DHV5 1058 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 LDHDQ86WU2 507 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 NUTM1Q86Y26 1132 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 ZNF34Q8IZ26 560 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 SYNE4Q8N205 404 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 PSMD1Q99460 953 aa23.29■■□□□ 1.32
RECQL4-207ENST00000534538 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
RECQL4-207ENST00000534538 HOXA10P31260 410 aaPredicted RBP23.28■■□□□ 1.32
RECQL4-207ENST00000534538 BABAM1Q9NWV8 329 aa23.28■■□□□ 1.32
RECQL4-207ENST00000534538 NUP98P52948 1817 aa23.28■■□□□ 1.32
RECQL4-207ENST00000534538 RIC1Q4ADV7 1423 aa23.27■■□□□ 1.32
RECQL4-207ENST00000534538 SCN4AP35499 1836 aa23.27■■□□□ 1.32
RECQL4-207ENST00000534538 FZD9O00144 591 aa23.27■■□□□ 1.32
RECQL4-207ENST00000534538 IARSP41252 1262 aaKnown RBP23.27■■□□□ 1.32
RECQL4-207ENST00000534538 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
RECQL4-207ENST00000534538 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
RECQL4-207ENST00000534538 GIGYF2Q6Y7W6 1299 aaKnown RBP23.27■■□□□ 1.32
RECQL4-207ENST00000534538 ABCC12Q96J65 1359 aa23.27■■□□□ 1.31
RECQL4-207ENST00000534538 GPTP24298 496 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 RALBP1Q15311 655 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 TSPYL4Q9UJ04 414 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 UBN2Q6ZU65 1347 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
RECQL4-207ENST00000534538 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
RECQL4-207ENST00000534538 RIPK4P57078 832 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms