RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
PACS1-214ENST00000533811 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
PACS1-214ENST00000533811 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
PACS1-214ENST00000533811 IL6STP40189 918 aaPredicted RBP12.5□□□□□ -0.41
PACS1-214ENST00000533811 LBX1P52954 281 aa12.5□□□□□ -0.41
PACS1-214ENST00000533811 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
PACS1-214ENST00000533811 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
PACS1-214ENST00000533811 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
PACS1-214ENST00000533811 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
PACS1-214ENST00000533811 PASKQ96RG2 1323 aa12.5□□□□□ -0.41
PACS1-214ENST00000533811 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
PACS1-214ENST00000533811 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
PACS1-214ENST00000533811 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 CAMTA2O94983 1202 aa12.49□□□□□ -0.41
PACS1-214ENST00000533811 SRGNP10124 158 aa12.49□□□□□ -0.41
PACS1-214ENST00000533811 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
PACS1-214ENST00000533811 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
PACS1-214ENST00000533811 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
PACS1-214ENST00000533811 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
PACS1-214ENST00000533811 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
PACS1-214ENST00000533811 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
PACS1-214ENST00000533811 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
PACS1-214ENST00000533811 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
PACS1-214ENST00000533811 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
PACS1-214ENST00000533811 EPHX2P34913 555 aa12.47□□□□□ -0.41
PACS1-214ENST00000533811 OLFM4Q6UX06 510 aa12.47□□□□□ -0.41
PACS1-214ENST00000533811 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
PACS1-214ENST00000533811 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
PACS1-214ENST00000533811 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
PACS1-214ENST00000533811 KCNQ3O43525 872 aa12.46□□□□□ -0.41
PACS1-214ENST00000533811 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
PACS1-214ENST00000533811 NPR1P16066 1061 aa12.46□□□□□ -0.41
PACS1-214ENST00000533811 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
PACS1-214ENST00000533811 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
PACS1-214ENST00000533811 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
PACS1-214ENST00000533811 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
PACS1-214ENST00000533811 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
PACS1-214ENST00000533811 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
PACS1-214ENST00000533811 GRM1Q13255 1194 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 DEFB115Q30KQ5 88 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 ZNF652Q9Y2D9 606 aa12.45□□□□□ -0.42
PACS1-214ENST00000533811 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
PACS1-214ENST00000533811 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
PACS1-214ENST00000533811 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
PACS1-214ENST00000533811 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
PACS1-214ENST00000533811 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
PACS1-214ENST00000533811 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
PACS1-214ENST00000533811 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
PACS1-214ENST00000533811 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
PACS1-214ENST00000533811 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
PACS1-214ENST00000533811 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
PACS1-214ENST00000533811 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
PACS1-214ENST00000533811 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
PACS1-214ENST00000533811 JDP2Q8WYK2 163 aa12.42□□□□□ -0.42
PACS1-214ENST00000533811 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
PACS1-214ENST00000533811 CCDC85CA6NKD9 419 aa12.41□□□□□ -0.42
PACS1-214ENST00000533811 LMOD1P29536 600 aaPredicted RBP12.41□□□□□ -0.42
PACS1-214ENST00000533811 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
PACS1-214ENST00000533811 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
PACS1-214ENST00000533811 TRPM7Q96QT4 1865 aa12.41□□□□□ -0.42
PACS1-214ENST00000533811 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
PACS1-214ENST00000533811 KIF7Q2M1P5 1343 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 FZD9O00144 591 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 SLC34A2O95436 690 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
PACS1-214ENST00000533811 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 FMR1Q06787 632 aaKnown RBP eCLIP12.4□□□□□ -0.42
PACS1-214ENST00000533811 GPC2Q8N158 579 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
PACS1-214ENST00000533811 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
PACS1-214ENST00000533811 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
PACS1-214ENST00000533811 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
PACS1-214ENST00000533811 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
PACS1-214ENST00000533811 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
PACS1-214ENST00000533811 TSKSQ9UJT2 592 aa12.39□□□□□ -0.43
PACS1-214ENST00000533811 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
PACS1-214ENST00000533811 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
PACS1-214ENST00000533811 TCERG1O14776 1098 aaKnown RBP12.38□□□□□ -0.43
PACS1-214ENST00000533811 ECE1P42892 770 aa12.38□□□□□ -0.43
PACS1-214ENST00000533811 HLFQ16534 295 aa12.38□□□□□ -0.43
PACS1-214ENST00000533811 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
PACS1-214ENST00000533811 MCM10Q7L590 875 aa12.38□□□□□ -0.43
PACS1-214ENST00000533811 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
PACS1-214ENST00000533811 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 EPS15P42566 896 aa12.37□□□□□ -0.43
PACS1-214ENST00000533811 MLLT1Q03111 559 aaPredicted RBP12.37□□□□□ -0.43
PACS1-214ENST00000533811 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms