RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 USP16Q9Y5T5 823 aa13.73□□□□□ -0.21
ATG13-220ENST00000533316 IL6STP40189 918 aaPredicted RBP13.72□□□□□ -0.21
ATG13-220ENST00000533316 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
ATG13-220ENST00000533316 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
ATG13-220ENST00000533316 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
ATG13-220ENST00000533316 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
ATG13-220ENST00000533316 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
ATG13-220ENST00000533316 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 ST5P78524 1137 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 PHACTR3Q96KR7 559 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
ATG13-220ENST00000533316 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
ATG13-220ENST00000533316 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
ATG13-220ENST00000533316 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
ATG13-220ENST00000533316 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
ATG13-220ENST00000533316 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
ATG13-220ENST00000533316 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
ATG13-220ENST00000533316 LBX1P52954 281 aa13.69□□□□□ -0.22
ATG13-220ENST00000533316 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATG13-220ENST00000533316 MAP1SQ66K74 1059 aaPredicted RBP13.69□□□□□ -0.22
ATG13-220ENST00000533316 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
ATG13-220ENST00000533316 NBPF5PQ86XG9 351 aaPredicted RBP13.69□□□□□ -0.22
ATG13-220ENST00000533316 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
ATG13-220ENST00000533316 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
ATG13-220ENST00000533316 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
ATG13-220ENST00000533316 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
ATG13-220ENST00000533316 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
ATG13-220ENST00000533316 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
ATG13-220ENST00000533316 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
ATG13-220ENST00000533316 NPM2Q86SE8 214 aaKnown RBP13.68□□□□□ -0.22
ATG13-220ENST00000533316 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
ATG13-220ENST00000533316 IQCA1LA6NCM1 817 aa13.67□□□□□ -0.22
ATG13-220ENST00000533316 FKBP4Q02790 459 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATG13-220ENST00000533316 AIDAQ96BJ3 306 aa13.67□□□□□ -0.22
ATG13-220ENST00000533316 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
ATG13-220ENST00000533316 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 EPHX2P34913 555 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 CTCFP49711 727 aaPredicted RBP13.66□□□□□ -0.22
ATG13-220ENST00000533316 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 HLFQ16534 295 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
ATG13-220ENST00000533316 MCM10Q7L590 875 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 WBP1LQ9NX94 342 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 HACL1Q9UJ83 578 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATG13-220ENST00000533316 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
ATG13-220ENST00000533316 NPR1P16066 1061 aa13.65□□□□□ -0.22
ATG13-220ENST00000533316 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
ATG13-220ENST00000533316 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
ATG13-220ENST00000533316 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
ATG13-220ENST00000533316 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
ATG13-220ENST00000533316 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
ATG13-220ENST00000533316 SCN4AP35499 1836 aa13.64□□□□□ -0.23
ATG13-220ENST00000533316 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
ATG13-220ENST00000533316 GRM1Q13255 1194 aa13.64□□□□□ -0.23
ATG13-220ENST00000533316 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
ATG13-220ENST00000533316 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
ATG13-220ENST00000533316 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
ATG13-220ENST00000533316 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
ATG13-220ENST00000533316 DEFB115Q30KQ5 88 aa13.63□□□□□ -0.23
ATG13-220ENST00000533316 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
ATG13-220ENST00000533316 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
ATG13-220ENST00000533316 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
ATG13-220ENST00000533316 COL4A5P29400 1685 aa13.63□□□□□ -0.23
ATG13-220ENST00000533316 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
ATG13-220ENST00000533316 FZD9O00144 591 aa13.62□□□□□ -0.23
ATG13-220ENST00000533316 TPTE2Q6XPS3 522 aa13.62□□□□□ -0.23
ATG13-220ENST00000533316 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
ATG13-220ENST00000533316 ADAMTSL1Q8N6G6 1762 aa13.62□□□□□ -0.23
ATG13-220ENST00000533316 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
ATG13-220ENST00000533316 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 RASSF10A6NK89 507 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 SNRPA1P09661 255 aaKnown RBP13.61□□□□□ -0.23
ATG13-220ENST00000533316 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
ATG13-220ENST00000533316 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 ABHD8Q96I13 439 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 TSKSQ9UJT2 592 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
ATG13-220ENST00000533316 TRAF5O00463 557 aa13.6□□□□□ -0.23
ATG13-220ENST00000533316 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
ATG13-220ENST00000533316 EPS15P42566 896 aa13.6□□□□□ -0.23
ATG13-220ENST00000533316 LTBP1Q14766 1721 aa13.6□□□□□ -0.23
ATG13-220ENST00000533316 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
ATG13-220ENST00000533316 CYP4F22Q6NT55 531 aa13.59□□□□□ -0.23
ATG13-220ENST00000533316 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATG13-220ENST00000533316 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
ATG13-220ENST00000533316 GPTP24298 496 aa13.58□□□□□ -0.24
ATG13-220ENST00000533316 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
ATG13-220ENST00000533316 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms