RNA–Protein interactions for RNA: ENST00000533296.5

SAMD3-215, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 1,436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-215ENST00000533296 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
SAMD3-215ENST00000533296 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
SAMD3-215ENST00000533296 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
SAMD3-215ENST00000533296 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
SAMD3-215ENST00000533296 RIMS1Q86UR5 1692 aaKnown RBP11.5□□□□□ -0.57
SAMD3-215ENST00000533296 NALCNQ8IZF0 1738 aa11.5□□□□□ -0.57
SAMD3-215ENST00000533296 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
SAMD3-215ENST00000533296 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
SAMD3-215ENST00000533296 TXNDC2Q86VQ3 553 aa11.5□□□□□ -0.57
SAMD3-215ENST00000533296 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
SAMD3-215ENST00000533296 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 NEFMP07197 916 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 LTKP29376 864 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 IL13P35225 146 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
SAMD3-215ENST00000533296 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 COG3Q96JB2 828 aa11.49□□□□□ -0.57
SAMD3-215ENST00000533296 XRN1Q8IZH2 1706 aaKnown RBP11.48□□□□□ -0.57
SAMD3-215ENST00000533296 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 SPDYE5A6NIY4 337 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 PPEF1O14829 653 aaPredicted RBP11.48□□□□□ -0.57
SAMD3-215ENST00000533296 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
SAMD3-215ENST00000533296 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
SAMD3-215ENST00000533296 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
SAMD3-215ENST00000533296 TTC21AQ8NDW8 1320 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
SAMD3-215ENST00000533296 USP6P35125 1406 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 ANKARQ7Z5J8 1434 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 MTMR2Q13614 643 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
SAMD3-215ENST00000533296 NFE2L2Q16236 605 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 ZKSCAN2Q63HK3 967 aa11.47□□□□□ -0.57
SAMD3-215ENST00000533296 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
SAMD3-215ENST00000533296 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
SAMD3-215ENST00000533296 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
SAMD3-215ENST00000533296 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
SAMD3-215ENST00000533296 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
SAMD3-215ENST00000533296 RIPK4P57078 832 aa11.46□□□□□ -0.57
SAMD3-215ENST00000533296 KIF16BQ96L93 1317 aa11.46□□□□□ -0.57
SAMD3-215ENST00000533296 KIF24Q5T7B8 1368 aa11.46□□□□□ -0.58
SAMD3-215ENST00000533296 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
SAMD3-215ENST00000533296 ARHGAP45Q92619 1136 aa11.45□□□□□ -0.58
SAMD3-215ENST00000533296 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
SAMD3-215ENST00000533296 NOP58Q9Y2X3 529 aaKnown RBP11.45□□□□□ -0.58
SAMD3-215ENST00000533296 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
SAMD3-215ENST00000533296 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
SAMD3-215ENST00000533296 IPO8O15397 1037 aaKnown RBP11.44□□□□□ -0.58
SAMD3-215ENST00000533296 LILRB3O75022 631 aa11.44□□□□□ -0.58
SAMD3-215ENST00000533296 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
SAMD3-215ENST00000533296 MVPQ14764 893 aaKnown RBP11.44□□□□□ -0.58
SAMD3-215ENST00000533296 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
SAMD3-215ENST00000533296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
SAMD3-215ENST00000533296 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
SAMD3-215ENST00000533296 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
SAMD3-215ENST00000533296 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
SAMD3-215ENST00000533296 DESI1Q6ICB0 168 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 NME9Q86XW9 330 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
SAMD3-215ENST00000533296 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
SAMD3-215ENST00000533296 RGPD1P0DJD0 1748 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 JUNDP17535 347 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 GNAI1P63096 354 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 ATF7IPQ6VMQ6 1270 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 PANK1Q8TE04 598 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
SAMD3-215ENST00000533296 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
SAMD3-215ENST00000533296 DDX19BQ9UMR2 479 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 COG6Q9Y2V7 657 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 FCF1Q9Y324 198 aaKnown RBP11.43□□□□□ -0.58
SAMD3-215ENST00000533296 ACEP12821 1306 aa11.43□□□□□ -0.58
SAMD3-215ENST00000533296 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
SAMD3-215ENST00000533296 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
SAMD3-215ENST00000533296 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
SAMD3-215ENST00000533296 QPCTQ16769 361 aa11.42□□□□□ -0.58
SAMD3-215ENST00000533296 ERICH6Q7L0X2 663 aa11.42□□□□□ -0.58
SAMD3-215ENST00000533296 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
SAMD3-215ENST00000533296 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
SAMD3-215ENST00000533296 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
SAMD3-215ENST00000533296 IGHDP01880 384 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 RLBP1P12271 317 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 C8orf34Q49A92 452 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 IL27Q8NEV9 243 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 SSH1Q8WYL5 1049 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 SETD1BQ9UPS6 1966 aaKnown RBP11.41□□□□□ -0.58
SAMD3-215ENST00000533296 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
SAMD3-215ENST00000533296 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
SAMD3-215ENST00000533296 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
SAMD3-215ENST00000533296 KDRP35968 1356 aa11.39□□□□□ -0.59
SAMD3-215ENST00000533296 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
SAMD3-215ENST00000533296 TRIM27P14373 513 aa11.39□□□□□ -0.59
SAMD3-215ENST00000533296 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
SAMD3-215ENST00000533296 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms