RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HMGN5P82970 282 aaKnown RBP14.36□□□□□ -0.11
BDNF-218ENST00000533246 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 CALCOCO1Q9P1Z2 691 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 ZNF518AQ6AHZ1 1483 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 STARD3NLO95772 234 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
BDNF-218ENST00000533246 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
BDNF-218ENST00000533246 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
BDNF-218ENST00000533246 UHRF1BP1LA0JNW5 1464 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 GIMAP6Q6P9H5 292 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 CFAP45Q9UL16 551 aa14.36□□□□□ -0.11
BDNF-218ENST00000533246 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
BDNF-218ENST00000533246 LMBR1LQ6UX01 489 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 IFNL2Q8IZJ0 200 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
BDNF-218ENST00000533246 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
BDNF-218ENST00000533246 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
BDNF-218ENST00000533246 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
BDNF-218ENST00000533246 ISM2Q6H9L7 571 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 BRF1Q92994 677 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 NPATQ14207 1427 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 BIN1O00499 593 aa14.34□□□□□ -0.11
BDNF-218ENST00000533246 POLR3DP05423 398 aaPredicted RBP14.34□□□□□ -0.11
BDNF-218ENST00000533246 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.11
BDNF-218ENST00000533246 AXDND1Q5T1B0 1012 aaPredicted RBP14.33□□□□□ -0.11
BDNF-218ENST00000533246 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.11
BDNF-218ENST00000533246 IQSEC3Q9UPP2 1182 aaPredicted RBP14.33□□□□□ -0.11
BDNF-218ENST00000533246 YTHDC2Q9H6S0 1430 aaKnown RBP14.33□□□□□ -0.11
BDNF-218ENST00000533246 GRM8O00222 908 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 GCP02774 474 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 NAP1L1P55209 391 aaKnown RBP14.33□□□□□ -0.12
BDNF-218ENST00000533246 KLHL40Q2TBA0 621 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 UBAC1Q9BSL1 405 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 PTPRTO14522 1441 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 OFD1O75665 1012 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 CHST3Q7LGC8 479 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
BDNF-218ENST00000533246 DEF6Q9H4E7 631 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 SLC4A8Q2Y0W8 1093 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 ZSCAN23Q3MJ62 389 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
BDNF-218ENST00000533246 ORAI2Q96SN7 254 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
BDNF-218ENST00000533246 ADGRL2O95490 1459 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
BDNF-218ENST00000533246 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 PLCD4Q9BRC7 762 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 PUS7Q96PZ0 661 aaKnown RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 SH2B1Q9NRF2 756 aaPredicted RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 GNL3LQ9NVN8 582 aaKnown RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
BDNF-218ENST00000533246 CCDC183Q5T5S1 534 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 HSPA2P54652 639 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 HSP90AB3PQ58FF7 597 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 CEP57L1Q8IYX8 460 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 USP26Q9BXU7 913 aa14.31□□□□□ -0.12
BDNF-218ENST00000533246 ZMYM3Q14202 1370 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 MBD5Q9P267 1494 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 SCAND2PQ9GZW5 306 aaPredicted RBP14.3□□□□□ -0.12
BDNF-218ENST00000533246 NAPBQ9H115 298 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 TMX1Q9H3N1 280 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 CHL1O00533 1208 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 ZNF213O14771 459 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 NBPF7P0C2Y1 421 aaPredicted RBP14.3□□□□□ -0.12
BDNF-218ENST00000533246 NEK1Q96PY6 1258 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 HOXC9P31274 260 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
BDNF-218ENST00000533246 KLHL10Q6JEL2 608 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 MICU3Q86XE3 530 aa14.3□□□□□ -0.12
BDNF-218ENST00000533246 ZNF622Q969S3 477 aaKnown RBP eCLIP14.3□□□□□ -0.12
BDNF-218ENST00000533246 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
BDNF-218ENST00000533246 IGHMBP2P38935 993 aaKnown RBP14.29□□□□□ -0.12
BDNF-218ENST00000533246 TEX35Q5T0J7 233 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 USP48Q86UV5 1035 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 TTC21AQ8NDW8 1320 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 CHMLP26374 656 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
BDNF-218ENST00000533246 CHAMP1Q96JM3 812 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 FAM173BQ6P4H8 233 aa14.29□□□□□ -0.12
BDNF-218ENST00000533246 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms