RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 TTC41PQ6P2S7 1318 aa18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 CUL4AQ13619 759 aa18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
CACNA1E-208ENST00000533229 EPB41L2O43491 1005 aaKnown RBP18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 MCM2P49736 904 aa18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 KLHL40Q2TBA0 621 aa18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 CWC27Q6UX04 472 aaKnown RBP18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
CACNA1E-208ENST00000533229 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 SASH1O94885 1247 aa18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 AK9Q5TCS8 1911 aa18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 RAD50Q92878 1312 aa18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 DCCP43146 1447 aa18.62■□□□□ 0.57
CACNA1E-208ENST00000533229 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 ECHDC1Q9NTX5 307 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 NEURL1BA8MQ27 555 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 COL18A1P39060 1754 aa18.61■□□□□ 0.57
CACNA1E-208ENST00000533229 SPATA31A3Q5VYP0 1347 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 AACSQ86V21 672 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 KLHDC4Q8TBB5 520 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 EAF2Q96CJ1 260 aaPredicted RBP18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 ISY1Q9ULR0 285 aaKnown RBP18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 SNX14Q9Y5W7 946 aa18.6■□□□□ 0.57
CACNA1E-208ENST00000533229 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 HSPA2P54652 639 aa18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 GCKRQ14397 625 aa18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 MYD88Q99836 296 aa18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
CACNA1E-208ENST00000533229 SNRPA1P09661 255 aaKnown RBP18.58■□□□□ 0.57
CACNA1E-208ENST00000533229 INTS4Q96HW7 963 aaKnown RBP18.58■□□□□ 0.57
CACNA1E-208ENST00000533229 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.57
CACNA1E-208ENST00000533229 SIL1Q9H173 461 aa18.58■□□□□ 0.57
CACNA1E-208ENST00000533229 PRPF40AO75400 957 aaKnown RBP18.58■□□□□ 0.56
CACNA1E-208ENST00000533229 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
CACNA1E-208ENST00000533229 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
CACNA1E-208ENST00000533229 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
CACNA1E-208ENST00000533229 TLR7Q9NYK1 1049 aaKnown RBP18.58■□□□□ 0.56
CACNA1E-208ENST00000533229 C5P01031 1676 aa18.57■□□□□ 0.56
CACNA1E-208ENST00000533229 BRD1O95696 1058 aa18.57■□□□□ 0.56
CACNA1E-208ENST00000533229 NEXNQ0ZGT2 675 aa18.57■□□□□ 0.56
CACNA1E-208ENST00000533229 G3BP1Q13283 466 aaKnown RBP eCLIP18.57■□□□□ 0.56
CACNA1E-208ENST00000533229 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
CACNA1E-208ENST00000533229 PTH1RQ03431 593 aa18.56■□□□□ 0.56
CACNA1E-208ENST00000533229 SCN11AQ9UI33 1791 aa18.56■□□□□ 0.56
CACNA1E-208ENST00000533229 CRYBG1Q9Y4K1 1723 aa18.56■□□□□ 0.56
CACNA1E-208ENST00000533229 TTC14Q96N46 770 aa18.56■□□□□ 0.56
CACNA1E-208ENST00000533229 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
CACNA1E-208ENST00000533229 KIAA1211Q6ZU35 1233 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 GPT2Q8TD30 523 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 RRAGDQ9NQL2 400 aaPredicted RBP18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 NCLP19338 710 aaKnown RBP18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 CABP4P57796 275 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 CAVIN1Q6NZI2 390 aaKnown RBP18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 EVI5LQ96CN4 794 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 GPATCH3Q96I76 525 aa18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 LARP6Q9BRS8 491 aaKnown RBP18.55■□□□□ 0.56
CACNA1E-208ENST00000533229 CPDO75976 1380 aa18.54■□□□□ 0.56
CACNA1E-208ENST00000533229 MRC1P22897 1456 aa18.54■□□□□ 0.56
CACNA1E-208ENST00000533229 CPA1P15085 419 aa18.54■□□□□ 0.56
CACNA1E-208ENST00000533229 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
CACNA1E-208ENST00000533229 ABCC6O95255 1503 aa18.53■□□□□ 0.56
CACNA1E-208ENST00000533229 AK2P54819 239 aa18.53■□□□□ 0.56
CACNA1E-208ENST00000533229 FAM227BQ96M60 508 aa18.53■□□□□ 0.56
CACNA1E-208ENST00000533229 NSFL1CQ9UNZ2 370 aaKnown RBP18.53■□□□□ 0.56
CACNA1E-208ENST00000533229 ATP5J2-PTCD1G3V325 749 aa18.52■□□□□ 0.56
CACNA1E-208ENST00000533229 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.56
CACNA1E-208ENST00000533229 ADCK5Q3MIX3 580 aa18.52■□□□□ 0.56
CACNA1E-208ENST00000533229 RUFY3Q7L099 469 aa18.52■□□□□ 0.56
CACNA1E-208ENST00000533229 RUFY2Q8WXA3 655 aa18.52■□□□□ 0.56
CACNA1E-208ENST00000533229 ZSCAN23Q3MJ62 389 aa18.52■□□□□ 0.55
CACNA1E-208ENST00000533229 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.55
CACNA1E-208ENST00000533229 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
CACNA1E-208ENST00000533229 PRPF40BQ6NWY9 871 aaKnown RBP18.51■□□□□ 0.55
CACNA1E-208ENST00000533229 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
CACNA1E-208ENST00000533229 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
CACNA1E-208ENST00000533229 CASTP20810 708 aaKnown RBP18.5■□□□□ 0.55
CACNA1E-208ENST00000533229 PTPN12Q05209 780 aaKnown RBP18.5■□□□□ 0.55
CACNA1E-208ENST00000533229 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms