RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.33
AP004550.1-201ENST00000532652 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 CAMTA2O94983 1202 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 ST5P78524 1137 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 TEFQ10587 303 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 LDHDQ86WU2 507 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 MASTLQ96GX5 879 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 PRDM10Q9NQV6 1147 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
AP004550.1-201ENST00000532652 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
AP004550.1-201ENST00000532652 A1BGP04217 495 aa17.07■□□□□ 0.32
AP004550.1-201ENST00000532652 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
AP004550.1-201ENST00000532652 L3MBTL3Q96JM7 780 aaPredicted RBP17.07■□□□□ 0.32
AP004550.1-201ENST00000532652 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
AP004550.1-201ENST00000532652 VEGFBP49765 207 aa17.06■□□□□ 0.32
AP004550.1-201ENST00000532652 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
AP004550.1-201ENST00000532652 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
AP004550.1-201ENST00000532652 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 ITGBL1O95965 494 aaPredicted RBP17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
AP004550.1-201ENST00000532652 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
AP004550.1-201ENST00000532652 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
AP004550.1-201ENST00000532652 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
AP004550.1-201ENST00000532652 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
AP004550.1-201ENST00000532652 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
AP004550.1-201ENST00000532652 KCNQ3O43525 872 aa17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 NBPF5PQ86XG9 351 aaPredicted RBP17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
AP004550.1-201ENST00000532652 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 NPR1P16066 1061 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 LBX1P52954 281 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
AP004550.1-201ENST00000532652 THSD7BQ9C0I4 1608 aa17■□□□□ 0.31
AP004550.1-201ENST00000532652 EPHX2P34913 555 aa17■□□□□ 0.31
AP004550.1-201ENST00000532652 OLFM4Q6UX06 510 aa17■□□□□ 0.31
AP004550.1-201ENST00000532652 CLEC4GQ6UXB4 293 aa17■□□□□ 0.31
AP004550.1-201ENST00000532652 USP16Q9Y5T5 823 aa17■□□□□ 0.31
AP004550.1-201ENST00000532652 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
AP004550.1-201ENST00000532652 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
AP004550.1-201ENST00000532652 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
AP004550.1-201ENST00000532652 KIF7Q2M1P5 1343 aa16.98■□□□□ 0.31
AP004550.1-201ENST00000532652 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
AP004550.1-201ENST00000532652 DEFB115Q30KQ5 88 aa16.98■□□□□ 0.31
AP004550.1-201ENST00000532652 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
AP004550.1-201ENST00000532652 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
AP004550.1-201ENST00000532652 KLRG2A4D1S0 409 aaPredicted RBP16.97■□□□□ 0.31
AP004550.1-201ENST00000532652 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
AP004550.1-201ENST00000532652 HSPA8P11142 646 aaKnown RBP16.97■□□□□ 0.31
AP004550.1-201ENST00000532652 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
AP004550.1-201ENST00000532652 PNMA8AQ86V59 439 aaPredicted RBP16.97■□□□□ 0.31
AP004550.1-201ENST00000532652 FZD9O00144 591 aa16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 NIP7Q9Y221 180 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 COL4A5P29400 1685 aa16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
AP004550.1-201ENST00000532652 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.3
AP004550.1-201ENST00000532652 TAF1P21675 1872 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 ABHD8Q96I13 439 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
AP004550.1-201ENST00000532652 LAMB2P55268 1798 aa16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 GPC2Q8N158 579 aa16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
AP004550.1-201ENST00000532652 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 ALDH1B1P30837 517 aa16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
AP004550.1-201ENST00000532652 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
AP004550.1-201ENST00000532652 RGL2O15211 777 aa16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 HLFQ16534 295 aa16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 PSMD1Q99460 953 aa16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
AP004550.1-201ENST00000532652 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms