RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ANKRD18BA2A2Z9 1011 aa17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 ARGLU1Q9NWB6 273 aaPredicted RBP17.99■□□□□ 0.47
PCDHA3-202ENST00000532566 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 MSH6P52701 1360 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 SYNMO15061 1565 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 CAMK4Q16566 473 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 NAPBQ9H115 298 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 GPTP24298 496 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 G2E3Q7L622 706 aa17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 NOL7Q9UMY1 257 aaKnown RBP17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
PCDHA3-202ENST00000532566 ZNF213O14771 459 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 LDHAL6AQ6ZMR3 332 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 DACH1Q9UI36 760 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 CCP110O43303 1012 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 BICDL1Q6ZP65 573 aa17.97■□□□□ 0.47
PCDHA3-202ENST00000532566 EXOC5O00471 708 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 C8orf76Q96K31 380 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 NEK1Q96PY6 1258 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 TRMT2AQ8IZ69 625 aaKnown RBP17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 YEATS2Q9ULM3 1422 aa17.96■□□□□ 0.47
PCDHA3-202ENST00000532566 PLEKHG3A1L390 1219 aa17.96■□□□□ 0.46
PCDHA3-202ENST00000532566 C19orf44Q9H6X5 657 aa17.96■□□□□ 0.46
PCDHA3-202ENST00000532566 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.46
PCDHA3-202ENST00000532566 TTC41PQ6P2S7 1318 aa17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 SNRKQ9NRH2 765 aa17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
PCDHA3-202ENST00000532566 FILIP1Q7Z7B0 1213 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 SLC5A1P13866 664 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 GUCY1B3Q02153 619 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 LMBR1LQ6UX01 489 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 MLH3Q9UHC1 1453 aa17.94■□□□□ 0.46
PCDHA3-202ENST00000532566 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 UBE2HP62256 183 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 CCT2P78371 535 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 NFATC2IPQ8NCF5 419 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 SMARCE1Q969G3 411 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 DDX19AQ9NUU7 478 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 RAB3GAP1Q15042 981 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
PCDHA3-202ENST00000532566 CCDC196A0A1B0GTZ2 297 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 GOLGA8BA8MQT2 603 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 CBFA2T2O43439 604 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 CHMLP26374 656 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 ADCY10Q96PN6 1610 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 MINDY4BA8MYZ0 360 aa17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 RBM27Q9P2N5 1060 aaKnown RBP17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
PCDHA3-202ENST00000532566 SMTNL1A8MU46 457 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 HOXB7P09629 217 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 ADAMTS2O95450 1211 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 ANO10Q9NW15 660 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 PIP4K2BP78356 416 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 MAGEC2Q9UBF1 373 aaPredicted RBP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 ZNF771Q7L3S4 317 aaPredicted RBP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 OTUD7AQ8TE49 926 aaPredicted RBP17.91■□□□□ 0.46
PCDHA3-202ENST00000532566 CHD1O14646 1710 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 ZSCAN23Q3MJ62 389 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 CCDC112Q8NEF3 446 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 CTAGE5O15320 804 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 PDE4CQ08493 712 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 CABLES1Q8TDN4 633 aa17.9■□□□□ 0.46
PCDHA3-202ENST00000532566 TEX35Q5T0J7 233 aa17.89■□□□□ 0.46
PCDHA3-202ENST00000532566 BRF1Q92994 677 aa17.89■□□□□ 0.46
PCDHA3-202ENST00000532566 DCAF5Q96JK2 942 aa17.89■□□□□ 0.45
PCDHA3-202ENST00000532566 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms