RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SRGNP10124 158 aa26.83■■□□□ 1.89
HIPK3-205ENST00000531504 BCORQ6W2J9 1755 aa26.83■■□□□ 1.89
HIPK3-205ENST00000531504 HSPA5P11021 654 aaKnown RBP26.82■■□□□ 1.88
HIPK3-205ENST00000531504 VEGFBP49765 207 aa26.82■■□□□ 1.88
HIPK3-205ENST00000531504 TEFQ10587 303 aa26.82■■□□□ 1.88
HIPK3-205ENST00000531504 ZNF496Q96IT1 587 aaPredicted RBP26.82■■□□□ 1.88
HIPK3-205ENST00000531504 ZNF790Q6PG37 636 aa26.81■■□□□ 1.88
HIPK3-205ENST00000531504 SIPA1L3O60292 1781 aaPredicted RBP26.8■■□□□ 1.88
HIPK3-205ENST00000531504 CCDC93Q567U6 631 aa26.8■■□□□ 1.88
HIPK3-205ENST00000531504 EAPPQ56P03 285 aaPredicted RBP26.79■■□□□ 1.88
HIPK3-205ENST00000531504 WBP1LQ9NX94 342 aa26.79■■□□□ 1.88
HIPK3-205ENST00000531504 DIAPH1O60610 1272 aaKnown RBP26.78■■□□□ 1.88
HIPK3-205ENST00000531504 CAMTA2O94983 1202 aa26.78■■□□□ 1.88
HIPK3-205ENST00000531504 ITGBL1O95965 494 aaPredicted RBP26.77■■□□□ 1.88
HIPK3-205ENST00000531504 LBX1P52954 281 aa26.77■■□□□ 1.88
HIPK3-205ENST00000531504 FMNL2Q96PY5 1086 aa26.77■■□□□ 1.88
HIPK3-205ENST00000531504 HACL1Q9UJ83 578 aa26.77■■□□□ 1.88
HIPK3-205ENST00000531504 CLEC11AQ9Y240 323 aa26.77■■□□□ 1.88
HIPK3-205ENST00000531504 ADAMTSL1Q8N6G6 1762 aa26.76■■□□□ 1.88
HIPK3-205ENST00000531504 AMER1Q5JTC6 1135 aaPredicted RBP26.76■■□□□ 1.87
HIPK3-205ENST00000531504 CLSPNQ9HAW4 1339 aa26.75■■□□□ 1.87
HIPK3-205ENST00000531504 FKBP4Q02790 459 aaKnown RBP eCLIP26.75■■□□□ 1.87
HIPK3-205ENST00000531504 PNMA8AQ86V59 439 aaPredicted RBP26.75■■□□□ 1.87
HIPK3-205ENST00000531504 DZIP3Q86Y13 1208 aaKnown RBP26.75■■□□□ 1.87
HIPK3-205ENST00000531504 GNAT3A8MTJ3 354 aa26.74■■□□□ 1.87
HIPK3-205ENST00000531504 SLC34A2O95436 690 aa26.74■■□□□ 1.87
HIPK3-205ENST00000531504 A1BGP04217 495 aa26.74■■□□□ 1.87
HIPK3-205ENST00000531504 NBPF5PQ86XG9 351 aaPredicted RBP26.74■■□□□ 1.87
HIPK3-205ENST00000531504 GAS2L2Q8NHY3 880 aa26.74■■□□□ 1.87
HIPK3-205ENST00000531504 ZNF541Q9H0D2 1346 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 RASSF10A6NK89 507 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 NPR1P16066 1061 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 EPHX2P34913 555 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 C7orf43Q8WVR3 580 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 ZNF652Q9Y2D9 606 aa26.73■■□□□ 1.87
HIPK3-205ENST00000531504 MAP2K1Q02750 393 aaPredicted RBP26.72■■□□□ 1.87
HIPK3-205ENST00000531504 DEFB115Q30KQ5 88 aa26.72■■□□□ 1.87
HIPK3-205ENST00000531504 CLEC4GQ6UXB4 293 aa26.71■■□□□ 1.87
HIPK3-205ENST00000531504 RTKN2Q8IZC4 609 aa26.71■■□□□ 1.87
HIPK3-205ENST00000531504 IL17REQ8NFR9 667 aa26.71■■□□□ 1.87
HIPK3-205ENST00000531504 ABHD8Q96I13 439 aa26.71■■□□□ 1.87
HIPK3-205ENST00000531504 ZNF277Q9NRM2 450 aaPredicted RBP26.71■■□□□ 1.87
HIPK3-205ENST00000531504 HSPA8P11142 646 aaKnown RBP26.7■■□□□ 1.86
HIPK3-205ENST00000531504 CNTROBQ8N137 903 aa26.69■■□□□ 1.86
HIPK3-205ENST00000531504 ABT1Q9ULW3 272 aaKnown RBP26.68■■□□□ 1.86
HIPK3-205ENST00000531504 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
HIPK3-205ENST00000531504 WDR33Q9C0J8 1336 aaKnown RBP26.67■■□□□ 1.86
HIPK3-205ENST00000531504 KLRG2A4D1S0 409 aaPredicted RBP26.66■■□□□ 1.86
HIPK3-205ENST00000531504 IARSP41252 1262 aaKnown RBP26.66■■□□□ 1.86
HIPK3-205ENST00000531504 FAM161AQ3B820 660 aa26.66■■□□□ 1.86
HIPK3-205ENST00000531504 MAP1SQ66K74 1059 aaPredicted RBP26.66■■□□□ 1.86
HIPK3-205ENST00000531504 TPTE2Q6XPS3 522 aa26.66■■□□□ 1.86
HIPK3-205ENST00000531504 GPC2Q8N158 579 aa26.66■■□□□ 1.86
HIPK3-205ENST00000531504 BTBD11A6QL63 1104 aa26.65■■□□□ 1.86
HIPK3-205ENST00000531504 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
HIPK3-205ENST00000531504 CEMIPQ8WUJ3 1361 aa26.65■■□□□ 1.86
HIPK3-205ENST00000531504 THSD7BQ9C0I4 1608 aa26.65■■□□□ 1.86
HIPK3-205ENST00000531504 FZD9O00144 591 aa26.64■■□□□ 1.86
HIPK3-205ENST00000531504 U2SURPO15042 1029 aaKnown RBP26.64■■□□□ 1.86
HIPK3-205ENST00000531504 RGL2O15211 777 aa26.64■■□□□ 1.86
HIPK3-205ENST00000531504 ALDH1B1P30837 517 aa26.64■■□□□ 1.86
HIPK3-205ENST00000531504 JDP2Q8WYK2 163 aa26.63■■□□□ 1.85
HIPK3-205ENST00000531504 BEGAINQ9BUH8 593 aa26.63■■□□□ 1.85
HIPK3-205ENST00000531504 COL3A1P02461 1466 aaPredicted RBP26.62■■□□□ 1.85
HIPK3-205ENST00000531504 NIP7Q9Y221 180 aaKnown RBP eCLIP26.62■■□□□ 1.85
HIPK3-205ENST00000531504 OLFM4Q6UX06 510 aa26.61■■□□□ 1.85
HIPK3-205ENST00000531504 SYNE4Q8N205 404 aa26.61■■□□□ 1.85
HIPK3-205ENST00000531504 LMOD1P29536 600 aaPredicted RBP26.6■■□□□ 1.85
HIPK3-205ENST00000531504 ECE1P42892 770 aa26.6■■□□□ 1.85
HIPK3-205ENST00000531504 PIP4K2AP48426 406 aaPredicted RBP26.6■■□□□ 1.85
HIPK3-205ENST00000531504 CC2D1BQ5T0F9 858 aaKnown RBP26.6■■□□□ 1.85
HIPK3-205ENST00000531504 DDX21Q9NR30 783 aaKnown RBP eCLIP26.6■■□□□ 1.85
HIPK3-205ENST00000531504 USP16Q9Y5T5 823 aa26.6■■□□□ 1.85
HIPK3-205ENST00000531504 KCNQ3O43525 872 aa26.59■■□□□ 1.85
HIPK3-205ENST00000531504 EIF6P56537 245 aaKnown RBP26.59■■□□□ 1.85
HIPK3-205ENST00000531504 PSMD1Q99460 953 aa26.59■■□□□ 1.85
HIPK3-205ENST00000531504 SNRPA1P09661 255 aaKnown RBP26.58■■□□□ 1.85
HIPK3-205ENST00000531504 PAXIP1Q6ZW49 1069 aaPredicted RBP26.58■■□□□ 1.85
HIPK3-205ENST00000531504 TRPM7Q96QT4 1865 aa26.57■■□□□ 1.84
HIPK3-205ENST00000531504 GTF2E1P29083 439 aaPredicted RBP26.57■■□□□ 1.84
HIPK3-205ENST00000531504 MLLT1Q03111 559 aaPredicted RBP26.57■■□□□ 1.84
HIPK3-205ENST00000531504 CAPNS2Q96L46 248 aa26.57■■□□□ 1.84
HIPK3-205ENST00000531504 CCDC85CA6NKD9 419 aa26.56■■□□□ 1.84
HIPK3-205ENST00000531504 CC2D2BQ6DHV5 1058 aa26.56■■□□□ 1.84
HIPK3-205ENST00000531504 GJA3Q9Y6H8 435 aa26.56■■□□□ 1.84
HIPK3-205ENST00000531504 FAM177BA6PVY3 158 aa26.55■■□□□ 1.84
HIPK3-205ENST00000531504 KIF7Q2M1P5 1343 aa26.54■■□□□ 1.84
HIPK3-205ENST00000531504 SNED1Q8TER0 1413 aa26.54■■□□□ 1.84
HIPK3-205ENST00000531504 LTBP1Q14766 1721 aa26.53■■□□□ 1.84
HIPK3-205ENST00000531504 PRAMEF22A3QJZ6 481 aa26.53■■□□□ 1.84
HIPK3-205ENST00000531504 PER1O15534 1290 aaPredicted RBP26.53■■□□□ 1.84
HIPK3-205ENST00000531504 GRIPAP1Q4V328 841 aa26.53■■□□□ 1.84
HIPK3-205ENST00000531504 GPR101Q96P66 508 aaPredicted RBP26.53■■□□□ 1.84
HIPK3-205ENST00000531504 GRM1Q13255 1194 aa26.52■■□□□ 1.84
HIPK3-205ENST00000531504 NYXQ9GZU5 481 aa26.52■■□□□ 1.84
HIPK3-205ENST00000531504 CRY2Q49AN0 593 aa26.51■■□□□ 1.83
HIPK3-205ENST00000531504 RTF1Q92541 710 aaKnown RBP26.51■■□□□ 1.83
HIPK3-205ENST00000531504 PRKAR2BP31323 418 aa26.5■■□□□ 1.83
HIPK3-205ENST00000531504 RGS19P49795 217 aa26.5■■□□□ 1.83
HIPK3-205ENST00000531504 CYP4F22Q6NT55 531 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms