RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
BRCA2-204ENST00000530893 PKP1Q13835 747 aa20.86■□□□□ 0.93
BRCA2-204ENST00000530893 CADPS2Q86UW7 1296 aa20.86■□□□□ 0.93
BRCA2-204ENST00000530893 C5P01031 1676 aa20.86■□□□□ 0.93
BRCA2-204ENST00000530893 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 LMBRD1Q9NUN5 540 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 ZDHHC9Q9Y397 364 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 MEGF6O75095 1541 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 DCAF5Q96JK2 942 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 ARXQ96QS3 562 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 IL25Q9H293 177 aa20.85■□□□□ 0.93
BRCA2-204ENST00000530893 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
BRCA2-204ENST00000530893 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
BRCA2-204ENST00000530893 RIC3Q7Z5B4 369 aa20.83■□□□□ 0.93
BRCA2-204ENST00000530893 PANK2Q9BZ23 570 aa20.83■□□□□ 0.93
BRCA2-204ENST00000530893 LSG1Q9H089 658 aaKnown RBP20.83■□□□□ 0.93
BRCA2-204ENST00000530893 CPDO75976 1380 aa20.83■□□□□ 0.93
BRCA2-204ENST00000530893 MAP4K4O95819 1239 aaPredicted RBP20.83■□□□□ 0.92
BRCA2-204ENST00000530893 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.92
BRCA2-204ENST00000530893 SUCLG2Q96I99 432 aa20.83■□□□□ 0.92
BRCA2-204ENST00000530893 BRD1O95696 1058 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 DIAPH3Q9NSV4 1193 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 SNRPA1P09661 255 aaKnown RBP20.82■□□□□ 0.92
BRCA2-204ENST00000530893 ZNF445P59923 1031 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 AIMP1Q12904 312 aaKnown RBP20.82■□□□□ 0.92
BRCA2-204ENST00000530893 G3BP1Q13283 466 aaKnown RBP eCLIP20.82■□□□□ 0.92
BRCA2-204ENST00000530893 GAS2L3Q86XJ1 694 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 EVI5LQ96CN4 794 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
BRCA2-204ENST00000530893 BICC1Q9H694 974 aaKnown RBP20.82■□□□□ 0.92
BRCA2-204ENST00000530893 IGKV5-2P06315 115 aa20.81■□□□□ 0.92
BRCA2-204ENST00000530893 CSB-PGBD3P0DP91 1061 aa20.81■□□□□ 0.92
BRCA2-204ENST00000530893 PARP4Q9UKK3 1724 aaKnown RBP20.81■□□□□ 0.92
BRCA2-204ENST00000530893 HIP1O00291 1037 aa20.8■□□□□ 0.92
BRCA2-204ENST00000530893 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
BRCA2-204ENST00000530893 TTC5Q8N0Z6 440 aa20.8■□□□□ 0.92
BRCA2-204ENST00000530893 METTL22Q9BUU2 404 aaPredicted RBP20.8■□□□□ 0.92
BRCA2-204ENST00000530893 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
BRCA2-204ENST00000530893 SNX14Q9Y5W7 946 aa20.8■□□□□ 0.92
BRCA2-204ENST00000530893 NEURL1BA8MQ27 555 aa20.8■□□□□ 0.92
BRCA2-204ENST00000530893 CWC27Q6UX04 472 aaKnown RBP20.8■□□□□ 0.92
BRCA2-204ENST00000530893 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
BRCA2-204ENST00000530893 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
BRCA2-204ENST00000530893 COL15A1P39059 1388 aa20.79■□□□□ 0.92
BRCA2-204ENST00000530893 KDM4FA0A1W2PPD8 638 aa20.79■□□□□ 0.92
BRCA2-204ENST00000530893 AACSQ86V21 672 aa20.79■□□□□ 0.92
BRCA2-204ENST00000530893 FMNL2Q96PY5 1086 aa20.79■□□□□ 0.92
BRCA2-204ENST00000530893 GCKRQ14397 625 aa20.78■□□□□ 0.92
BRCA2-204ENST00000530893 XAGE3Q8WTP9 111 aa20.78■□□□□ 0.92
BRCA2-204ENST00000530893 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
BRCA2-204ENST00000530893 SASH1O94885 1247 aa20.78■□□□□ 0.92
BRCA2-204ENST00000530893 TTC14Q96N46 770 aa20.78■□□□□ 0.92
BRCA2-204ENST00000530893 ANKRD13DQ6ZTN6 518 aa20.77■□□□□ 0.92
BRCA2-204ENST00000530893 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
BRCA2-204ENST00000530893 CYP27B1O15528 508 aa20.77■□□□□ 0.91
BRCA2-204ENST00000530893 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.91
BRCA2-204ENST00000530893 MBD3O95983 291 aa20.77■□□□□ 0.91
BRCA2-204ENST00000530893 MYL6BP14649 208 aa20.77■□□□□ 0.91
BRCA2-204ENST00000530893 LRP10Q7Z4F1 713 aa20.77■□□□□ 0.91
BRCA2-204ENST00000530893 KCNB2Q92953 911 aa20.77■□□□□ 0.91
BRCA2-204ENST00000530893 LAMB4A4D0S4 1761 aa20.76■□□□□ 0.91
BRCA2-204ENST00000530893 DDX17Q92841 729 aaKnown RBP20.76■□□□□ 0.91
BRCA2-204ENST00000530893 TM6SF1Q9BZW5 370 aa20.76■□□□□ 0.91
BRCA2-204ENST00000530893 WDR33Q9C0J8 1336 aaKnown RBP20.75■□□□□ 0.91
BRCA2-204ENST00000530893 ZSCAN23Q3MJ62 389 aa20.75■□□□□ 0.91
BRCA2-204ENST00000530893 CAVIN1Q6NZI2 390 aaKnown RBP20.75■□□□□ 0.91
BRCA2-204ENST00000530893 EAF2Q96CJ1 260 aaPredicted RBP20.75■□□□□ 0.91
BRCA2-204ENST00000530893 MYD88Q99836 296 aa20.75■□□□□ 0.91
BRCA2-204ENST00000530893 SNRKQ9NRH2 765 aa20.75■□□□□ 0.91
BRCA2-204ENST00000530893 ERBB4Q15303 1308 aa20.75■□□□□ 0.91
BRCA2-204ENST00000530893 LIMCH1Q9UPQ0 1083 aa20.74■□□□□ 0.91
BRCA2-204ENST00000530893 CABP4P57796 275 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 CABLES1Q8TDN4 633 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 COPRSQ9NQ92 184 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.73■□□□□ 0.91
BRCA2-204ENST00000530893 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 ARFGEF2Q9Y6D5 1785 aa20.73■□□□□ 0.91
BRCA2-204ENST00000530893 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
BRCA2-204ENST00000530893 NOL8Q76FK4 1167 aaKnown RBP20.73■□□□□ 0.91
BRCA2-204ENST00000530893 AFDNP55196 1824 aaKnown RBP20.72■□□□□ 0.91
BRCA2-204ENST00000530893 CHRNA2Q15822 529 aa20.72■□□□□ 0.91
BRCA2-204ENST00000530893 GPT2Q8TD30 523 aa20.72■□□□□ 0.91
BRCA2-204ENST00000530893 ANP32BQ92688 251 aaKnown RBP20.72■□□□□ 0.91
BRCA2-204ENST00000530893 NASPP49321 788 aaPredicted RBP20.71■□□□□ 0.91
BRCA2-204ENST00000530893 AK2P54819 239 aa20.71■□□□□ 0.91
BRCA2-204ENST00000530893 RABL6Q3YEC7 729 aaPredicted RBP20.71■□□□□ 0.91
BRCA2-204ENST00000530893 VPS53Q5VIR6 699 aa20.71■□□□□ 0.91
BRCA2-204ENST00000530893 CCDC171Q6TFL3 1326 aa20.71■□□□□ 0.91
BRCA2-204ENST00000530893 GLI3P10071 1580 aa20.71■□□□□ 0.91
BRCA2-204ENST00000530893 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
BRCA2-204ENST00000530893 CCDC173Q0VFZ6 552 aa20.71■□□□□ 0.91
BRCA2-204ENST00000530893 NECTIN1Q15223 517 aa20.7■□□□□ 0.9
BRCA2-204ENST00000530893 ZSWIM6Q9HCJ5 1215 aa20.7■□□□□ 0.9
BRCA2-204ENST00000530893 CASTP20810 708 aaKnown RBP20.7■□□□□ 0.9
BRCA2-204ENST00000530893 PLBD2Q8NHP8 589 aa20.7■□□□□ 0.9
BRCA2-204ENST00000530893 ZSCAN31Q96LW9 406 aaPredicted RBP20.7■□□□□ 0.9
BRCA2-204ENST00000530893 RRAGDQ9NQL2 400 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms