RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 NEDD1Q8NHV4 660 aa13.45□□□□□ -0.26
CCDC90B-217ENST00000530253 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-217ENST00000530253 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
CCDC90B-217ENST00000530253 BEND7Q8N7W2 519 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-217ENST00000530253 MTMR14Q8NCE2 650 aa13.44□□□□□ -0.26
CCDC90B-217ENST00000530253 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
CCDC90B-217ENST00000530253 INO80Q9ULG1 1556 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-217ENST00000530253 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC90B-217ENST00000530253 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
CCDC90B-217ENST00000530253 ZFYVE16Q7Z3T8 1539 aa13.43□□□□□ -0.26
CCDC90B-217ENST00000530253 ARHGEF40Q8TER5 1519 aa13.43□□□□□ -0.26
CCDC90B-217ENST00000530253 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-217ENST00000530253 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
CCDC90B-217ENST00000530253 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
CCDC90B-217ENST00000530253 CNKSR1Q969H4 720 aa13.42□□□□□ -0.26
CCDC90B-217ENST00000530253 MAGI2Q86UL8 1455 aa13.42□□□□□ -0.26
CCDC90B-217ENST00000530253 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 MAP2K3P46734 347 aa13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 PRM3Q9NNZ6 103 aa13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 PHF24Q9UPV7 400 aa13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
CCDC90B-217ENST00000530253 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 ABCC5O15440 1437 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 YEATS2Q9ULM3 1422 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 CFHR5Q9BXR6 569 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
CCDC90B-217ENST00000530253 ATP7AQ04656 1500 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 GPR37L1O60883 481 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 LBRQ14739 615 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 ESCO1Q5FWF5 840 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 GNASQ5JWF2 1037 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 ACDQ96AP0 544 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 RAB6BQ9NRW1 208 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 DAPK1P53355 1430 aa13.39□□□□□ -0.27
CCDC90B-217ENST00000530253 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
CCDC90B-217ENST00000530253 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-217ENST00000530253 CENPCQ03188 943 aa13.37□□□□□ -0.27
CCDC90B-217ENST00000530253 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
CCDC90B-217ENST00000530253 IL2RAP01589 272 aa13.36□□□□□ -0.27
CCDC90B-217ENST00000530253 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
CCDC90B-217ENST00000530253 C9orf84Q5VXU9 1444 aa13.36□□□□□ -0.27
CCDC90B-217ENST00000530253 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
CCDC90B-217ENST00000530253 SIGLEC1Q9BZZ2 1709 aa13.36□□□□□ -0.27
CCDC90B-217ENST00000530253 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 SPAG9O60271 1321 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
CCDC90B-217ENST00000530253 OIP5O43482 229 aa13.34□□□□□ -0.27
CCDC90B-217ENST00000530253 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-217ENST00000530253 XAGE2Q96GT9 111 aa13.34□□□□□ -0.27
CCDC90B-217ENST00000530253 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
CCDC90B-217ENST00000530253 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
CCDC90B-217ENST00000530253 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-217ENST00000530253 DCAF5Q96JK2 942 aa13.33□□□□□ -0.28
CCDC90B-217ENST00000530253 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
CCDC90B-217ENST00000530253 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
CCDC90B-217ENST00000530253 ATP10AO60312 1499 aa13.33□□□□□ -0.28
CCDC90B-217ENST00000530253 MSTNO14793 375 aa13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 USP4Q13107 963 aa13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 HRH3Q9Y5N1 445 aa13.32□□□□□ -0.28
CCDC90B-217ENST00000530253 EFHC2Q5JST6 749 aa13.31□□□□□ -0.28
CCDC90B-217ENST00000530253 DOLKQ9UPQ8 538 aa13.31□□□□□ -0.28
CCDC90B-217ENST00000530253 PHKA2P46019 1235 aa13.3□□□□□ -0.28
CCDC90B-217ENST00000530253 PLA2G4EQ3MJ16 856 aa13.3□□□□□ -0.28
CCDC90B-217ENST00000530253 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-217ENST00000530253 A2MP01023 1474 aa13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 AGLP35573 1532 aa13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 SLFNL1Q499Z3 407 aa13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 NCOA1Q15788 1441 aa13.29□□□□□ -0.28
CCDC90B-217ENST00000530253 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 ALYREFQ86V81 257 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 RHBDD1Q8TEB9 315 aa13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 ATXN7L1Q9ULK2 861 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
CCDC90B-217ENST00000530253 MKL2Q9ULH7 1088 aa13.27□□□□□ -0.29
CCDC90B-217ENST00000530253 ROCK1Q13464 1354 aa13.27□□□□□ -0.29
CCDC90B-217ENST00000530253 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.29
CCDC90B-217ENST00000530253 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
CCDC90B-217ENST00000530253 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-217ENST00000530253 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
CCDC90B-217ENST00000530253 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
CCDC90B-217ENST00000530253 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
CCDC90B-217ENST00000530253 MADDQ8WXG6 1647 aa13.25□□□□□ -0.29
CCDC90B-217ENST00000530253 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
CCDC90B-217ENST00000530253 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms