RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 KLHL10Q6JEL2 608 aa9.27□□□□□ -0.92
CTNND1-222ENST00000529919 DDX17Q92841 729 aaKnown RBP9.27□□□□□ -0.92
CTNND1-222ENST00000529919 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.92
CTNND1-222ENST00000529919 ABCF2Q9UG63 623 aa9.27□□□□□ -0.92
CTNND1-222ENST00000529919 KIF5CO60282 957 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 SLFN5Q08AF3 891 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 IMMTQ16891 758 aaKnown RBP9.27□□□□□ -0.93
CTNND1-222ENST00000529919 MAP9Q49MG5 647 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-222ENST00000529919 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 BMP2KQ9NSY1 1161 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-222ENST00000529919 MYD88Q99836 296 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 STK32BQ9NY57 414 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 RAI14Q9P0K7 980 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 A0A087WZG4 1122 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 TOP1P11387 765 aaKnown RBP9.27□□□□□ -0.93
CTNND1-222ENST00000529919 BAG6P46379 1132 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 METTL24Q5JXM2 366 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 CCDC113Q9H0I3 377 aa9.27□□□□□ -0.93
CTNND1-222ENST00000529919 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 LTKP29376 864 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 CTNNA3Q9UI47 895 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 UBE2Q2Q8WVN8 375 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 LRP2BPQ9P2M1 347 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 YEATS2Q9ULM3 1422 aa9.26□□□□□ -0.93
CTNND1-222ENST00000529919 SPINK5Q9NQ38 1064 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-222ENST00000529919 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 MAP2K1Q02750 393 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SOGA3Q5TF21 947 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 UBAC1Q9BSL1 405 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 DYNC1I1O14576 645 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 MCM5P33992 734 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 ST5P78524 1137 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 NUTM1Q86Y26 1132 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SPECC1Q5M775 1068 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 ADCY5O95622 1261 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 IFIT1P09914 478 aaKnown RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 IFIT5Q13325 482 aaKnown RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SPA17Q15506 151 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 RNF187Q5TA31 235 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-222ENST00000529919 GPATCH11Q8N954 259 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
CTNND1-222ENST00000529919 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 DNA2P51530 1060 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 PPP1R42Q7Z4L9 355 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 RBM25P49756 843 aaKnown RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 ZNF165P49910 485 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 LUZP1Q86V48 1076 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 ZFYVE16Q7Z3T8 1539 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 MX1P20591 662 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 CASQ1P31415 396 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 PAFAH1B1P43034 410 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 LMAN1P49257 510 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 TICAM2Q86XR7 235 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 CPLX3Q8WVH0 158 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 PIBF1Q8WXW3 757 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 TFIP11Q9UBB9 837 aaKnown RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 GLRX3O76003 335 aaKnown RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 CLCN1P35523 988 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 TDO2P48775 406 aa9.24□□□□□ -0.93
CTNND1-222ENST00000529919 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-222ENST00000529919 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 SLC39A6Q13433 755 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 SSH1Q8WYL5 1049 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 NEMFO60524 1076 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 IDH1O75874 414 aaKnown RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 APBA3O96018 575 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 BMS1Q14692 1282 aaKnown RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 IFFO1Q0D2I5 559 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 KLHL40Q2TBA0 621 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 FAM107BQ9H098 131 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 ZSWIM4Q9H7M6 989 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 PARP3Q9Y6F1 533 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 GBP2P32456 591 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 RARSP54136 660 aaKnown RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 GRM1Q13255 1194 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 ZSCAN25Q6NSZ9 544 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 KIF1BPQ96EK5 621 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 TMX1Q9H3N1 280 aa9.23□□□□□ -0.93
CTNND1-222ENST00000529919 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-222ENST00000529919 CDC5LQ99459 802 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms