RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 MAP2K1Q02750 393 aaPredicted RBP14.1□□□□□ -0.15
COPB1-207ENST00000529866 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
COPB1-207ENST00000529866 PNMA8AQ86V59 439 aaPredicted RBP14.1□□□□□ -0.15
COPB1-207ENST00000529866 RASSF10A6NK89 507 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 CAMTA2O94983 1202 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 ITGBL1O95965 494 aaPredicted RBP14.09□□□□□ -0.15
COPB1-207ENST00000529866 EPHX2P34913 555 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
COPB1-207ENST00000529866 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
COPB1-207ENST00000529866 ABHD8Q96I13 439 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 SCN7AQ01118 1682 aa14.09□□□□□ -0.15
COPB1-207ENST00000529866 DIAPH1O60610 1272 aaKnown RBP14.08□□□□□ -0.16
COPB1-207ENST00000529866 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
COPB1-207ENST00000529866 NPR1P16066 1061 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 DEFB115Q30KQ5 88 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
COPB1-207ENST00000529866 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 ABT1Q9ULW3 272 aaKnown RBP14.08□□□□□ -0.16
COPB1-207ENST00000529866 ZNF652Q9Y2D9 606 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 ZNF541Q9H0D2 1346 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 FER1L6Q2WGJ9 1857 aa14.08□□□□□ -0.16
COPB1-207ENST00000529866 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
COPB1-207ENST00000529866 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
COPB1-207ENST00000529866 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
COPB1-207ENST00000529866 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
COPB1-207ENST00000529866 C7orf43Q8WVR3 580 aa14.07□□□□□ -0.16
COPB1-207ENST00000529866 BEGAINQ9BUH8 593 aa14.07□□□□□ -0.16
COPB1-207ENST00000529866 ZNF277Q9NRM2 450 aaPredicted RBP14.07□□□□□ -0.16
COPB1-207ENST00000529866 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
COPB1-207ENST00000529866 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 A1BGP04217 495 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
COPB1-207ENST00000529866 CLEC4GQ6UXB4 293 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 RNF123Q5XPI4 1314 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 WDR33Q9C0J8 1336 aaKnown RBP14.06□□□□□ -0.16
COPB1-207ENST00000529866 ANKRD31Q8N7Z5 1873 aa14.06□□□□□ -0.16
COPB1-207ENST00000529866 UBR2Q8IWV8 1755 aa14.05□□□□□ -0.16
COPB1-207ENST00000529866 MAP1SQ66K74 1059 aaPredicted RBP14.05□□□□□ -0.16
COPB1-207ENST00000529866 GPC2Q8N158 579 aa14.05□□□□□ -0.16
COPB1-207ENST00000529866 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
COPB1-207ENST00000529866 SCN4AP35499 1836 aa14.04□□□□□ -0.16
COPB1-207ENST00000529866 IARSP41252 1262 aaKnown RBP14.04□□□□□ -0.16
COPB1-207ENST00000529866 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
COPB1-207ENST00000529866 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
COPB1-207ENST00000529866 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
COPB1-207ENST00000529866 JDP2Q8WYK2 163 aa14.04□□□□□ -0.16
COPB1-207ENST00000529866 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
COPB1-207ENST00000529866 FZD9O00144 591 aa14.03□□□□□ -0.16
COPB1-207ENST00000529866 RGL2O15211 777 aa14.03□□□□□ -0.16
COPB1-207ENST00000529866 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
COPB1-207ENST00000529866 ECE1P42892 770 aa14.03□□□□□ -0.16
COPB1-207ENST00000529866 SLX4Q8IY92 1834 aa14.02□□□□□ -0.16
COPB1-207ENST00000529866 BTBD11A6QL63 1104 aa14.02□□□□□ -0.17
COPB1-207ENST00000529866 ALDH1B1P30837 517 aa14.02□□□□□ -0.17
COPB1-207ENST00000529866 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
COPB1-207ENST00000529866 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
COPB1-207ENST00000529866 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.17
COPB1-207ENST00000529866 CCDC85CA6NKD9 419 aa14.01□□□□□ -0.17
COPB1-207ENST00000529866 U2SURPO15042 1029 aaKnown RBP14.01□□□□□ -0.17
COPB1-207ENST00000529866 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
COPB1-207ENST00000529866 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
COPB1-207ENST00000529866 SYNE4Q8N205 404 aa14.01□□□□□ -0.17
COPB1-207ENST00000529866 PSMD1Q99460 953 aa14.01□□□□□ -0.17
COPB1-207ENST00000529866 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
COPB1-207ENST00000529866 CEMIPQ8WUJ3 1361 aa14□□□□□ -0.17
COPB1-207ENST00000529866 CC2D2BQ6DHV5 1058 aa14□□□□□ -0.17
COPB1-207ENST00000529866 OLFM4Q6UX06 510 aa14□□□□□ -0.17
COPB1-207ENST00000529866 CAPNS2Q96L46 248 aa14□□□□□ -0.17
COPB1-207ENST00000529866 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
COPB1-207ENST00000529866 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
COPB1-207ENST00000529866 GRM1Q13255 1194 aa13.99□□□□□ -0.17
COPB1-207ENST00000529866 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
COPB1-207ENST00000529866 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
COPB1-207ENST00000529866 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
COPB1-207ENST00000529866 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
COPB1-207ENST00000529866 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
COPB1-207ENST00000529866 CC2D1BQ5T0F9 858 aaKnown RBP13.98□□□□□ -0.17
COPB1-207ENST00000529866 GPR101Q96P66 508 aaPredicted RBP13.98□□□□□ -0.17
COPB1-207ENST00000529866 USP16Q9Y5T5 823 aa13.98□□□□□ -0.17
COPB1-207ENST00000529866 FAM177BA6PVY3 158 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 KCNQ3O43525 872 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 CA12O43570 354 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 RGS19P49795 217 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 CYP4F22Q6NT55 531 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
COPB1-207ENST00000529866 BCORQ6W2J9 1755 aa13.96□□□□□ -0.17
COPB1-207ENST00000529866 MAP2K2P36507 400 aa13.96□□□□□ -0.17
COPB1-207ENST00000529866 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
COPB1-207ENST00000529866 LARGE2Q8N3Y3 721 aa13.96□□□□□ -0.17
COPB1-207ENST00000529866 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
COPB1-207ENST00000529866 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.17
COPB1-207ENST00000529866 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
COPB1-207ENST00000529866 SCNN1DP51172 638 aa13.95□□□□□ -0.18
COPB1-207ENST00000529866 CRY2Q49AN0 593 aa13.95□□□□□ -0.18
COPB1-207ENST00000529866 RPGRQ92834 1020 aaKnown RBP13.95□□□□□ -0.18
COPB1-207ENST00000529866 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
COPB1-207ENST00000529866 TLL2Q9Y6L7 1015 aa13.95□□□□□ -0.18
COPB1-207ENST00000529866 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms