RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 RAD21O60216 631 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 ANXA1P04083 346 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 HMGB1P09429 215 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 UQCRFS1P1P0C7P4 283 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 RFC4P35249 363 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 TTC22Q5TAA0 569 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 TRIM22Q8IYM9 498 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 ZNF396Q96N95 335 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 BOLA2Q9H3K6 86 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 SLC52A2Q9HAB3 445 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 PCDHB15Q9Y5E8 787 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 ARHGEF40Q8TER5 1519 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 PRR36Q9H6K5 1346 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 TDO2P48775 406 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 FOXD4L6Q3SYB3 417 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 FOXD4L3Q6VB84 417 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 RPGRQ92834 1020 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 JAKMIP1Q96N16 626 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 ZNF287Q9HBT7 754 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 ABCA6Q8N139 1617 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 CDK12Q9NYV4 1490 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 ERVV-2B6SEH9 535 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 LETM1O95202 739 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 IL15P40933 162 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 RRP12Q5JTH9 1297 aaKnown RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 CCDC8Q9H0W5 538 aaPredicted RBP5.56□□□□□ -1.52
CASP4-207ENST00000529565 DCTPP1Q9H773 170 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 KIDINS220Q9ULH0 1771 aa5.56□□□□□ -1.52
CASP4-207ENST00000529565 CCDC69A6NI79 296 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 RGL2O15211 777 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 TPD52L1Q16890 204 aaPredicted RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 ARHGEF25Q86VW2 580 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 SLF2Q8IX21 1173 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 SMC5Q8IY18 1101 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 NYXQ9GZU5 481 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 SPINK5Q9NQ38 1064 aaPredicted RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 TPM2P07951 284 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 NFKBIBQ15653 356 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 GLIPR1L2Q4G1C9 344 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 DIP2BQ9P265 1576 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 RNF123Q5XPI4 1314 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 IGSF1Q8N6C5 1336 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 JMYQ8N9B5 988 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 UBAC1Q9BSL1 405 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 SH2B1Q9NRF2 756 aaPredicted RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 ADGRL3Q9HAR2 1447 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 CLSTN1O94985 981 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 TPM3P06753 285 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 ZFYP08048 801 aaPredicted RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 CEP85Q6P2H3 762 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 DZIP3Q86Y13 1208 aaKnown RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 PLBD2Q8NHP8 589 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 UTP14AQ9BVJ6 771 aaKnown RBP5.55□□□□□ -1.52
CASP4-207ENST00000529565 ABCF2Q9UG63 623 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 TCEAL9Q9UHQ7 104 aa5.55□□□□□ -1.52
CASP4-207ENST00000529565 TTC41PQ6P2S7 1318 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 DLC1Q96QB1 1528 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 LDHCP07864 332 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 RLBP1P12271 317 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 ST5P78524 1137 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 SASS6Q6UVJ0 657 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 ANKRD20A12PQ8NF67 263 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 WASF1Q92558 559 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 SETDB2Q96T68 719 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 ANKIB1Q9P2G1 1089 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 ZNF219Q9P2Y4 722 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 PDE1AP54750 535 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 KRT24Q2M2I5 525 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 LMBR1LQ6UX01 489 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 TBC1D9Q6ZT07 1266 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 BBXQ8WY36 941 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 ACSBG1Q96GR2 724 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 NAP1L5Q96NT1 182 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 PLEKHF1Q96S99 279 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 RNF41Q9H4P4 317 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 HMG20BQ9P0W2 317 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 CLTCQ00610 1675 aaKnown RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 ERBB4Q15303 1308 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 ZBTB7BO15156 539 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 TPM1P09493 284 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 PARP10Q53GL7 1025 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 SPTY2D1Q68D10 685 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 METTL22Q9BUU2 404 aaPredicted RBP5.54□□□□□ -1.52
CASP4-207ENST00000529565 TMOD2Q9NZR1 351 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 MED14O60244 1454 aa5.54□□□□□ -1.52
CASP4-207ENST00000529565 CASTP20810 708 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 EIF4A1P60842 406 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 ANKRD18AQ8IVF6 992 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 NLRP3Q96P20 1036 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 NAPBQ9H115 298 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 LGR6Q9HBX8 967 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 RTCBQ9Y3I0 505 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 TULP4Q9NRJ4 1543 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 LARP1BQ659C4 914 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 PRPF40BQ6NWY9 871 aaKnown RBP5.53□□□□□ -1.52
CASP4-207ENST00000529565 CCDC191Q8NCU4 936 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 PHKG2P15735 406 aa5.53□□□□□ -1.52
CASP4-207ENST00000529565 KRT85P78386 507 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms