RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 PRR5LQ6MZQ0 368 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 ZNF790Q6PG37 636 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 BRIP1Q9BX63 1249 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 TEX13AQ9BXU3 409 aaPredicted RBP8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
CHRNA6-202ENST00000529467 HEG1Q9ULI3 1381 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 GNAT3A8MTJ3 354 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 C21orf2O43822 256 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 PDE6BP35913 854 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 SIPA1L3O60292 1781 aaPredicted RBP8.35□□□□□ -1.07
CHRNA6-202ENST00000529467 TIAM2Q8IVF5 1701 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 SLX4Q8IY92 1834 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 KCNQ3O43525 872 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 CAMTA2O94983 1202 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 A1BGP04217 495 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 TEFQ10587 303 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
CHRNA6-202ENST00000529467 LTBP3Q9NS15 1303 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 COL3A1P02461 1466 aaPredicted RBP8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 PRR29P0C7W0 189 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 SRGNP10124 158 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 TNS4Q8IZW8 715 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 CEMIPQ8WUJ3 1361 aa8.33□□□□□ -1.08
CHRNA6-202ENST00000529467 COL11A2P13942 1736 aaPredicted RBP8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 DDNO94850 711 aaPredicted RBP8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 C7orf43Q8WVR3 580 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 TAOK3Q9H2K8 898 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 NPC1L1Q9UHC9 1359 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 CACNA1SQ13698 1873 aa8.32□□□□□ -1.08
CHRNA6-202ENST00000529467 SCN7AQ01118 1682 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 KLRG2A4D1S0 409 aaPredicted RBP8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 BTBD11A6QL63 1104 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 CHADLQ6NUI6 762 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 CLEC4GQ6UXB4 293 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
CHRNA6-202ENST00000529467 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 ST5P78524 1137 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 SOGA3Q5TF21 947 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 BCORQ6W2J9 1755 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
CHRNA6-202ENST00000529467 SCN4AP35499 1836 aa8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 NBPF26B4DH59 902 aa8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 NPHP1O15259 732 aa8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 SNRPA1P09661 255 aaKnown RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 NBPF10Q6P3W6 841 aaKnown RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 NBPF5PQ86XG9 351 aaPredicted RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 NBPF15Q8N660 670 aa8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 MKRN1Q9UHC7 482 aaKnown RBP8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
CHRNA6-202ENST00000529467 PCNTO95613 3336 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 RGL2O15211 777 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 ITGBL1O95965 494 aaPredicted RBP8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 NPR1P16066 1061 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 TPTE2Q6XPS3 522 aa8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 TAF1DQ9H5J8 278 aaPredicted RBP8.28□□□□□ -1.08
CHRNA6-202ENST00000529467 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 HLFQ16534 295 aa8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 OLFM4Q6UX06 510 aa8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 MCM10Q7L590 875 aa8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 ZNF652Q9Y2D9 606 aa8.27□□□□□ -1.09
CHRNA6-202ENST00000529467 CNTNAP1P78357 1384 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 FZD9O00144 591 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 FOXN1O15353 648 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
CHRNA6-202ENST00000529467 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms