RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, human

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR2-215	ENST00000529008	CFAP53	Q96M91	514 aa		10.82	□□□□□ -0.68
SSR2-215	ENST00000529008	RSPH6A	Q9H0K4	717 aa		10.82	□□□□□ -0.68
SSR2-215	ENST00000529008	PDZRN3	Q9UPQ7	1066 aa		10.82	□□□□□ -0.68
SSR2-215	ENST00000529008	DLEC1	Q9Y238	1755 aa		10.82	□□□□□ -0.68
SSR2-215	ENST00000529008	COL11A2	P13942	1736 aa	Predicted RBP	10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	POTEC	B2RU33	542 aa		10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	NEFL	P07196	543 aa		10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	HSPA1A	P0DMV8	641 aa	Known RBP	10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	HSPA1B	P0DMV9	641 aa	Known RBP	10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	MCM10	Q7L590	875 aa		10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	CNKSR1	Q969H4	720 aa		10.81	□□□□□ -0.68
SSR2-215	ENST00000529008	DDN	O94850	711 aa	Predicted RBP	10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	SRGN	P10124	158 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	STYK1	Q6J9G0	422 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	TNS4	Q8IZW8	715 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	RTF1	Q92541	710 aa	Known RBP	10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	MASTL	Q96GX5	879 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	USP16	Q9Y5T5	823 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	LTBP3	Q9NS15	1303 aa		10.8	□□□□□ -0.68
SSR2-215	ENST00000529008	FAM177B	A6PVY3	158 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	POTEI	P0CG38	1075 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	POTEJ	P0CG39	1038 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	SOGA3	Q5TF21	947 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	NUDC	Q9Y266	331 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	ZNF652	Q9Y2D9	606 aa		10.79	□□□□□ -0.68
SSR2-215	ENST00000529008	SNRPA1	P09661	255 aa	Known RBP	10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	DCTN1	Q14203	1278 aa		10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	CCDC93	Q567U6	631 aa		10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	CHADL	Q6NUI6	762 aa		10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	SBF1	O95248	1867 aa		10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	ANKRD31	Q8N7Z5	1873 aa		10.78	□□□□□ -0.68
SSR2-215	ENST00000529008	OLFM4	Q6UX06	510 aa		10.77	□□□□□ -0.69
SSR2-215	ENST00000529008	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.77	□□□□□ -0.69
SSR2-215	ENST00000529008	MKRN1	Q9UHC7	482 aa	Known RBP	10.77	□□□□□ -0.69
SSR2-215	ENST00000529008	ZNF541	Q9H0D2	1346 aa		10.77	□□□□□ -0.69
SSR2-215	ENST00000529008	SIPA1L3	O60292	1781 aa	Predicted RBP	10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	IQCA1L	A6NCM1	817 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	NBPF26	B4DH59	902 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	NPR1	P16066	1061 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	PPP2R1A	P30153	589 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	NBPF10	Q6P3W6	841 aa	Known RBP	10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	CLEC4G	Q6UXB4	293 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	NBPF15	Q8N660	670 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	MRS2	Q9HD23	443 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	CREBZF	Q9NS37	354 aa		10.76	□□□□□ -0.69
SSR2-215	ENST00000529008	BCOR	Q6W2J9	1755 aa		10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	EAPP	Q56P03	285 aa	Predicted RBP	10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	TPTE2	Q6XPS3	522 aa		10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	C7orf43	Q8WVR3	580 aa		10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	ABCC12	Q96J65	1359 aa		10.75	□□□□□ -0.69
SSR2-215	ENST00000529008	VIRMA	Q69YN4	1812 aa	Known RBP	10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	GTF2E1	P29083	439 aa	Predicted RBP	10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	HLF	Q16534	295 aa		10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	LDHD	Q86WU2	507 aa		10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	NGEF	Q8N5V2	710 aa		10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	MIS18A	Q9NYP9	233 aa		10.74	□□□□□ -0.69
SSR2-215	ENST00000529008	KLRG2	A4D1S0	409 aa	Predicted RBP	10.73	□□□□□ -0.69
SSR2-215	ENST00000529008	NUTM1	Q86Y26	1132 aa		10.73	□□□□□ -0.69
SSR2-215	ENST00000529008	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.73	□□□□□ -0.69
SSR2-215	ENST00000529008	RNF123	Q5XPI4	1314 aa		10.73	□□□□□ -0.69
SSR2-215	ENST00000529008	CNTNAP1	P78357	1384 aa		10.73	□□□□□ -0.69
SSR2-215	ENST00000529008	SLX4	Q8IY92	1834 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	RGL2	O15211	777 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	HTATSF1	O43719	755 aa	Known RBP	10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	IARS	P41252	1262 aa	Known RBP	10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	TAF7	Q15545	349 aa	Predicted RBP	10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	RTKN2	Q8IZC4	609 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	HACL1	Q9UJ83	578 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	PASK	Q96RG2	1323 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	FER1L6	Q2WGJ9	1857 aa		10.72	□□□□□ -0.69
SSR2-215	ENST00000529008	NEFM	P07197	916 aa		10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	GPT	P24298	496 aa		10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	EPHX2	P34913	555 aa		10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	KIF6	Q6ZMV9	814 aa		10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	THUMPD2	Q9BTF0	503 aa	Known RBP	10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	CLEC11A	Q9Y240	323 aa		10.71	□□□□□ -0.69
SSR2-215	ENST00000529008	MAP3K15	Q6ZN16	1313 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	TMEM88B	A6NKF7	163 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	MYL6B	P14649	208 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	ALDH1B1	P30837	517 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	MAP1S	Q66K74	1059 aa	Predicted RBP	10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	SLC51A	Q86UW1	340 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	SYNE4	Q8N205	404 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	RPGR	Q92834	1020 aa	Known RBP	10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	NYX	Q9GZU5	481 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	ZBTB3	Q9H5J0	574 aa		10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	RRP7A	Q9Y3A4	280 aa	Known RBP	10.7	□□□□□ -0.7
SSR2-215	ENST00000529008	SNED1	Q8TER0	1413 aa		10.69	□□□□□ -0.7
SSR2-215	ENST00000529008	UBN2	Q6ZU65	1347 aa		10.69	□□□□□ -0.7
SSR2-215	ENST00000529008	FZD9	O00144	591 aa		10.69	□□□□□ -0.7
SSR2-215	ENST00000529008	FOXN1	O15353	648 aa		10.69	□□□□□ -0.7

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